RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 WRAP73Q9P2S5 460 aaPredicted RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 PLXNB2O15031 1838 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 BIN1O00499 593 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 ZBTB39O15060 712 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 UBA1P22314 1058 aaKnown RBP11.44□□□□□ -0.58
SRP54-208ENST00000555557 MCM6Q14566 821 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 EPHA7Q15375 998 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 CCL14Q16627 93 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 HYIQ5T013 277 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 USP6NLQ92738 828 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 PYM1Q9BRP8 204 aaKnown RBP11.44□□□□□ -0.58
SRP54-208ENST00000555557 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
SRP54-208ENST00000555557 DIS3Q9Y2L1 958 aaKnown RBP11.44□□□□□ -0.58
SRP54-208ENST00000555557 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 CENPFP49454 3210 aa11.44□□□□□ -0.58
SRP54-208ENST00000555557 CUL4BQ13620 913 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 KANK3Q6NY19 840 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 TRMT1LQ7Z2T5 733 aaKnown RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 COPS5Q92905 334 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 FUCA2Q9BTY2 467 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 POLR3CQ9BUI4 534 aaPredicted RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 SLC5A4Q9NY91 659 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 SLC9A2Q9UBY0 812 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 USP25Q9UHP3 1055 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 GABRQQ9UN88 632 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 NFASCO94856 1347 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 KDM3AQ9Y4C1 1321 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 FCGRTP55899 365 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 KRT76Q01546 638 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 SP3Q02447 781 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 TAPT1Q6NXT6 567 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 ELOA2Q8IYF1 753 aaPredicted RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 LARP4BQ92615 738 aaKnown RBP11.43□□□□□ -0.58
SRP54-208ENST00000555557 RAD54LQ92698 747 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 SENP7Q9BQF6 1050 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 LXNQ9BS40 222 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 NT5C3AQ9H0P0 336 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 KBTBD4Q9NVX7 518 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 TCEAL9Q9UHQ7 104 aa11.43□□□□□ -0.58
SRP54-208ENST00000555557 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 FARP2O94887 1054 aaPredicted RBP11.42□□□□□ -0.58
SRP54-208ENST00000555557 GGPS1O95749 300 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
SRP54-208ENST00000555557 TXNP10599 105 aaKnown RBP11.42□□□□□ -0.58
SRP54-208ENST00000555557 TGFB3P10600 412 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 CYP2C19P33261 490 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 RGS2P41220 211 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 ADCYAP1R1P41586 468 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 ACTR2P61160 394 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 TYRO3Q06418 890 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 DPYDQ12882 1025 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 GSE1Q14687 1217 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
SRP54-208ENST00000555557 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
SRP54-208ENST00000555557 CCDC62Q6P9F0 684 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
SRP54-208ENST00000555557 PCDHA10Q9Y5I2 948 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 MCM3APO60318 1980 aa11.42□□□□□ -0.58
SRP54-208ENST00000555557 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 P4HBP07237 508 aaKnown RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 HOXC6P09630 235 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 PLA2G4BP0C869 781 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 JAK3P52333 1124 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 NEDD9Q14511 834 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 TTLL4Q14679 1199 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 UGCGQ16739 394 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SV2BQ7L1I2 683 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SMARCE1Q969G3 411 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 CCDC34Q96HJ3 373 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 CUEDC2Q9H467 287 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 MLXIPQ9HAP2 919 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 TUFT1Q9NNX1 390 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 TUBE1Q9UJT0 475 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 DNM3Q9UQ16 869 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 MYMKA6NI61 221 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 HSPA1AP0DMV8 641 aaKnown RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 HSPA1BP0DMV9 641 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms