RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 FBXO21O94952 628 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 KNG1P01042 644 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 CSF2RBP32927 897 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 GFRA1P56159 465 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 DGCR2P98153 550 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 TNNI3KQ59H18 835 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
SCFD1-216ENST00000555550 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 PIP4K2CQ8TBX8 421 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 PHOSPHO1Q8TCT1 267 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 CHFRQ96EP1 664 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 SLC6A20Q9NP91 592 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 DLL4Q9NR61 685 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 ACTR10Q9NZ32 417 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 HSPBP1Q9NZL4 362 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
SCFD1-216ENST00000555550 B2RBV5 119 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 E9PSI1 815 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 LTFP02788 710 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 DNAJA1P31689 397 aaKnown RBP6.15□□□□□ -1.42
SCFD1-216ENST00000555550 ARID5AQ03989 594 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 TESK1Q15569 626 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 AGBL4Q5VU57 503 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 AJUBAQ96IF1 538 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 ZFP69BQ9UJL9 534 aa6.15□□□□□ -1.42
SCFD1-216ENST00000555550 KRIT1O00522 736 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 MAFKO60675 156 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 ZNF202O95125 648 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 TRIM48Q8IWZ4 208 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 FUKQ8N0W3 1084 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 C1orf159Q96HA4 380 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 ARHGAP20Q9P2F6 1191 aa6.14□□□□□ -1.43
SCFD1-216ENST00000555550 PPARGC1AQ9UBK2 798 aaKnown RBP6.14□□□□□ -1.43
SCFD1-216ENST00000555550 R3HCC1Q9Y3T6 440 aaKnown RBP6.14□□□□□ -1.43
SCFD1-216ENST00000555550 NARSO43776 548 aaKnown RBP6.13□□□□□ -1.43
SCFD1-216ENST00000555550 MSCO60682 206 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 DDAH1O94760 285 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-216ENST00000555550 COL6A2P12110 1019 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 COMTP21964 271 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 ETFBP38117 255 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 GRIA2P42262 883 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 PFKPQ01813 784 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 ABHD18Q0P651 414 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 TUSC3Q13454 348 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 NOLC1Q14978 699 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCFD1-216ENST00000555550 LSM12Q3MHD2 195 aaKnown RBP6.13□□□□□ -1.43
SCFD1-216ENST00000555550 FAM178BQ8IXR5 827 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 NEIL1Q96FI4 390 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-216ENST00000555550 TINF2Q9BSI4 451 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 IKZF4Q9H2S9 585 aa6.13□□□□□ -1.43
SCFD1-216ENST00000555550 SUSD5O60279 629 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 FAHP16930 419 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 SMN1Q16637 294 aaKnown RBP6.12□□□□□ -1.43
SCFD1-216ENST00000555550 PAN2Q504Q3 1202 aaKnown RBP6.12□□□□□ -1.43
SCFD1-216ENST00000555550 SLC35F1Q5T1Q4 408 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 Q6ZSN1 163 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 IFNL2Q8IZJ0 200 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 KATNBL1Q9H079 304 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 KCND1Q9NSA2 647 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 PRKAG3Q9UGI9 489 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 NPFFR2Q9Y5X5 522 aa6.12□□□□□ -1.43
SCFD1-216ENST00000555550 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
SCFD1-216ENST00000555550 IL18BPO95998 194 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 CHGBP05060 677 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 ENO2P09104 434 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-216ENST00000555550 ACO1P21399 889 aaKnown RBP6.11□□□□□ -1.43
SCFD1-216ENST00000555550 PTH1RQ03431 593 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 FXNQ16595 210 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 TTLL11Q8NHH1 800 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 EDAQ92838 391 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
SCFD1-216ENST00000555550 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 ZNF408Q9H9D4 720 aa6.11□□□□□ -1.43
SCFD1-216ENST00000555550 FGRP09769 529 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 RAC3P60763 192 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 USP10Q14694 798 aaKnown RBP6.1□□□□□ -1.43
SCFD1-216ENST00000555550 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 OTOP3Q7RTS5 596 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 MCF2L2Q86YR7 1114 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 C1orf210Q8IVY1 113 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 KCNJ15Q99712 375 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 TELO2Q9Y4R8 837 aa6.1□□□□□ -1.43
SCFD1-216ENST00000555550 H0Y858 1186 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 CAPNS1P04632 268 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 C1SP09871 688 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 INHBEP58166 350 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 DPTQ07507 201 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 CD276Q5ZPR3 534 aa6.09□□□□□ -1.43
SCFD1-216ENST00000555550 MRM1Q6IN84 353 aaKnown RBP6.09□□□□□ -1.43
SCFD1-216ENST00000555550 NKRFO15226 690 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCFD1-216ENST00000555550 MCM7P33993 719 aa6.08□□□□□ -1.44
SCFD1-216ENST00000555550 SLC43A3Q8NBI5 491 aa6.08□□□□□ -1.44
SCFD1-216ENST00000555550 HNRNPLLQ8WVV9 542 aaKnown RBP6.08□□□□□ -1.44
SCFD1-216ENST00000555550 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms