RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 AKR1B10O60218 316 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 HEXIM1O94992 359 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 KRT14P02533 472 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PDHBP11177 359 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 ADCY7P51828 1080 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 TNNC1P63316 161 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 CUL1Q13616 776 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PDIA5Q14554 519 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 CRYMQ14894 314 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 AGBL2Q5U5Z8 902 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 KLHDC7AQ5VTJ3 777 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SV2BQ7L1I2 683 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 BANK1Q8NDB2 785 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC45Q96CN5 670 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SGSM3Q96HU1 749 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC40A1Q9NP59 571 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 MTMR4Q9NYA4 1195 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 IGKV6D-41A0A0C4DH26 115 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 PVALEFA0A1B0GWK0 134 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 GMNCA6NCL1 334 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MYBP10242 640 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 EZRP15311 586 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 GCFC2P16383 781 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 ASIC1P78348 528 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 GUCY1A3Q02108 690 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 GABPAQ06546 454 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 CALCRLQ16602 461 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MAN2A1Q16706 1144 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 TTC19Q6DKK2 380 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 SH2D3CQ8N5H7 860 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 CYFIP2Q96F07 1278 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 ODF2LQ9ULJ1 636 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC37AA6NMS7 1700 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 FOCADQ5VW36 1801 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 EIF4A3P38919 411 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 TECP42680 631 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 CARSP49589 748 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MTMR3Q13615 1198 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 VWA3BQ502W6 1294 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MIEF2Q96C03 454 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 PLIN2Q99541 437 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 VAT1LQ9HCJ6 419 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 EPB41L5Q9HCM4 733 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-210ENST00000555252 EP400Q96L91 3159 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 ATP8B3O60423 1300 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 E7EVH7 732 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC26A4O43511 780 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 DNAJC8O75937 253 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 GLI1P08151 1106 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 IFT88Q13099 833 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 XRCC4Q13426 336 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 SPDYCQ5MJ68 293 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 KCTD16Q68DU8 428 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 SMCR8Q8TEV9 937 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 CDK5RAP3Q96JB5 506 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 RABEP2Q9H5N1 569 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 ATP6V0A4Q9HBG4 840 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 BIN2Q9UBW5 565 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
MTHFD1-210ENST00000555252 PNMA6FA0A0J9YX94 578 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 A0A1B0GUA9 196 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 BTNL10A8MVZ5 291 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 TTLL1O95922 423 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CALRP27797 417 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 GUCY2DQ02846 1103 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 PSMD2Q13200 908 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 SEPT2Q15019 361 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms