RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 OVCH1Q7RTY7 1134 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 IGSF22Q8N9C0 903 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 LINC01356Q8N9X3 169 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 SH3RF2Q8TEC5 729 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 NINJ1Q92982 152 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 NOX5Q96PH1 765 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 TMEM209Q96SK2 561 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 GORASP1Q9BQQ3 440 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 CD244Q9BZW8 370 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 CD2APQ9Y5K6 639 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 SH3D21A4FU49 640 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 MAN2B1O00754 1011 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 CYP7B1O75881 506 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 ENO2P09104 434 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 FZD5Q13467 585 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 ARHGAP44Q17R89 818 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 GIMAP6Q6P9H5 292 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 HHIPL2Q6UWX4 724 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 PTRH1Q86Y79 214 aaKnown RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 C2orf69Q8N8R5 385 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 WRNIP1Q96S55 665 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 RIC8BQ9NVN3 520 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 SAMD15Q9P1V8 674 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 PLAAQ9Y263 795 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
SCFD1-214ENST00000554819 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
SCFD1-214ENST00000554819 IGSF3O75054 1194 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 CLSTN1O94985 981 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 PTPN1P18031 435 aaKnown RBP5.84□□□□□ -1.47
SCFD1-214ENST00000554819 SDSP20132 328 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 ITGA1P56199 1179 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 SMAD4Q13485 552 aaKnown RBP5.84□□□□□ -1.47
SCFD1-214ENST00000554819 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 TMEM177Q53S58 311 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 VASNQ6EMK4 673 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 ABHD17CQ6PCB6 329 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 KIAA0907Q7Z7F0 614 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-214ENST00000554819 WNK4Q96J92 1243 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 CLIC6Q96NY7 704 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 SMURF1Q9HCE7 757 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 CABP5Q9NP86 173 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 NTMQ9P121 344 aa5.84□□□□□ -1.47
SCFD1-214ENST00000554819 SLC12A8A0AV02 714 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 FFAR3O14843 346 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 THBS2P35442 1172 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 VWA3BQ502W6 1294 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 PLEKHG4Q58EX7 1191 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 STK32CQ86UX6 486 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 DLL4Q9NR61 685 aa5.83□□□□□ -1.48
SCFD1-214ENST00000554819 SPATA6Q9NWH7 488 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-214ENST00000554819 FAM90A27PA6NNH2 459 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 M0R2C6 588 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 ACOT7O00154 380 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 HIP1RO75146 1068 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 JMJD7P0C870 316 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 RPL13P26373 211 aaKnown RBP5.82□□□□□ -1.48
SCFD1-214ENST00000554819 HSD3B2P26439 372 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 ADAM9Q13443 819 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 C21orf62-AS1Q17RA5 79 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 VMACQ2NL98 169 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 CFAP100Q494V2 611 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 PIK3R6Q5UE93 754 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 CD276Q5ZPR3 534 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 SDE2Q6IQ49 451 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 TMC5Q6UXY8 1006 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 OTOP1Q7RTM1 612 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 ZNF526Q8TF50 670 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-214ENST00000554819 SYT3Q9BQG1 590 aa5.82□□□□□ -1.48
SCFD1-214ENST00000554819 SLKQ9H2G2 1235 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-214ENST00000554819 SCDO00767 359 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 KCNK3O14649 394 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 GLRX3O76003 335 aaKnown RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 SARSP49591 514 aaKnown RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 HERVK_113P62684 666 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 PFKPQ01813 784 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 DLX2Q07687 328 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 DBPQ10586 325 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 ZNF460Q14592 562 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 CDCA2Q69YH5 1023 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 LIPIQ6XZB0 460 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 LRRTM3Q86VH5 581 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 PROSER1Q86XN7 944 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 SP8Q8IXZ3 490 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 AHI1Q8N157 1196 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 CARFQ8N187 725 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 CHST14Q8NCH0 376 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 DDX1Q92499 740 aaKnown RBP5.81□□□□□ -1.48
SCFD1-214ENST00000554819 MFSD3Q96ES6 412 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 BOCQ9BWV1 1114 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 KCNH7Q9NS40 1196 aa5.81□□□□□ -1.48
SCFD1-214ENST00000554819 PRAMEF25A6NGN4 478 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms