RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 FGD4Q96M96 766 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 MMTAG2Q9BU76 263 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 ZNF341Q9BYN7 854 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 TANGO6Q9C0B7 1094 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 TGIF2Q9GZN2 237 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 METTL5Q9NRN9 209 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 AFG3L2Q9Y4W6 797 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 ESYT2A0FGR8 921 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 TMEM232C9JQI7 657 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CPLX1O14810 134 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 TDP2O95551 362 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 IGHA2P01877 340 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CALM1P0DP23 149 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CALM2P0DP24 149 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CALM3P0DP25 149 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 VCAM1P19320 739 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 BMP6P22004 513 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 SMARCA1P28370 1054 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 SART3Q15020 963 aaKnown RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 ZSCAN23Q3MJ62 389 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 ASPRV1Q53RT3 343 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 MUM1L1Q5H9M0 696 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 SYDE2Q5VT97 1194 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CST9Q5W186 159 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 MAP1SQ66K74 1059 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CAVIN1Q6NZI2 390 aaKnown RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 FOXR1Q6PIV2 292 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 USP17L6PQ6QN14 398 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 SCYL3Q8IZE3 742 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 FMR1NBQ8N0W7 255 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CTCFLQ8NI51 663 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 ARMC5Q96C12 935 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 C12orf42Q96LP6 360 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 UIMC1Q96RL1 719 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 WDR18Q9BV38 432 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 PANK2Q9BZ23 570 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 KIAA1683Q9H0B3 1180 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 RANBP17Q9H2T7 1088 aaKnown RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 FOXP1Q9H334 677 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-230ENST00000554673 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 CABP5Q9NP86 173 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 ADAMTS5Q9UNA0 930 aa6.7□□□□□ -1.34
ATXN3-230ENST00000554673 ERICH2A1L162 156 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 H7C1D1 291 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 NFIBO00712 420 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 CTNND1O60716 968 aaKnown RBP6.69□□□□□ -1.34
ATXN3-230ENST00000554673 LGR5O75473 907 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 FAM13AO94988 1023 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ADH1AP07327 375 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 BMP3P12645 472 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 PDCP20941 246 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 CASP1P29466 404 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 CDC25AP30304 524 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 PTGIRP43119 386 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 NDUFA8P51970 172 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ZNF445P59923 1031 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 SPP2Q13103 211 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ZNF174Q15697 407 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 GPR162Q16538 588 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 INF2Q27J81 1249 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 CCDC96Q2M329 555 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 JAKMIP3Q5VZ66 844 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ZNF662Q6ZS27 426 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 PIK3AP1Q6ZUJ8 805 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 HEATR3Q7Z4Q2 680 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 APOBEC3FQ8IUX4 373 aaKnown RBP6.69□□□□□ -1.34
ATXN3-230ENST00000554673 GRAMD1CQ8IYS0 662 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 BLIDQ8IZY5 108 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 CYP2W1Q8TAV3 490 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 HAS1Q92839 578 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ATG4CQ96DT6 458 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 MBOAT7Q96N66 472 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 WRNIP1Q96S55 665 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ZIC5Q96T25 663 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 ZSCAN16Q9H4T2 348 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-230ENST00000554673 RRAGCQ9HB90 399 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 PCDHA4Q9UN74 947 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 RPTORQ8N122 1335 aa6.69□□□□□ -1.34
ATXN3-230ENST00000554673 IGLV3-22A0A075B6J6 115 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 A0A1B0GVL5 298 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 H3BQV1 296 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 ZBTB5O15062 677 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 YEATS4O95619 227 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 ATP2B1P20020 1258 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 PTGS1P23219 599 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 HOXA13P31271 388 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-230ENST00000554673 KRT2P35908 639 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 SLC1A4P43007 532 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 NT5C2P49902 561 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 HMGCS2P54868 508 aa6.68□□□□□ -1.34
ATXN3-230ENST00000554673 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms