RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 L1CAMP32004 1257 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 ZNF76P36508 570 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 CORO7P57737 925 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 HTRA3P83110 453 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-227ENST00000554491 NT5DC1Q5TFE4 455 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 SAPCD2Q86UD0 394 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 USP48Q86UV5 1035 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 FERMT3Q86UX7 667 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-227ENST00000554491 ADCY4Q8NFM4 1077 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 DBR1Q9UK59 544 aaKnown RBP5.56□□□□□ -1.52
ATXN3-227ENST00000554491 SF3B6Q9Y3B4 125 aaKnown RBP5.56□□□□□ -1.52
ATXN3-227ENST00000554491 DLC1Q96QB1 1528 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 UTRNP46939 3433 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 TTC36A6NLP5 189 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 PPP1R11O60927 126 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-227ENST00000554491 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 FANCCQ00597 558 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 POU4F1Q01851 419 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 VPS72Q15906 364 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 EZH2Q15910 746 aaKnown RBP5.55□□□□□ -1.52
ATXN3-227ENST00000554491 TMCO4Q5TGY1 634 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 RBBP8NLQ8NC74 664 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-227ENST00000554491 NLGN2Q8NFZ4 835 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 MAP7D2Q96T17 732 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 BACH2Q9BYV9 841 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 RNF38Q9H0F5 515 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 SPON1Q9HCB6 807 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
ATXN3-227ENST00000554491 COL14A1Q05707 1796 aaKnown RBP5.55□□□□□ -1.52
ATXN3-227ENST00000554491 NPHP3Q7Z494 1330 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 SH3D21A4FU49 640 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 STXBP3O00186 592 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 PMLP29590 882 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 SPATS1Q496A3 300 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 UBXN11Q5T124 520 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 ZFYVE27Q5T4F4 411 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 CCDC81Q6ZN84 652 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 B3GNT8Q7Z7M8 397 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 ALG3Q92685 438 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 HAUS7Q99871 368 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 RWDD3Q9Y3V2 267 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 LAS1LQ9Y4W2 734 aaKnown RBP5.54□□□□□ -1.52
ATXN3-227ENST00000554491 DUSP10Q9Y6W6 482 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 MYOM3Q5VTT5 1437 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 PRAG1Q86YV5 1406 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 METP08581 1390 aa5.54□□□□□ -1.52
ATXN3-227ENST00000554491 KCNQ2O43526 872 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 NCAM1P13591 858 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 ZNF16P17020 682 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-227ENST00000554491 RACK1P63244 317 aaKnown RBP5.53□□□□□ -1.52
ATXN3-227ENST00000554491 TCEAL1Q15170 157 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 HHIPL2Q6UWX4 724 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 FAM177A1Q8N128 213 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-227ENST00000554491 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
ATXN3-227ENST00000554491 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 CAMKK2Q96RR4 588 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 PCDHB10Q9UN67 800 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
ATXN3-227ENST00000554491 FMN2Q9NZ56 1722 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 CRYBG1Q9Y4K1 1723 aa5.53□□□□□ -1.52
ATXN3-227ENST00000554491 A0A087WZG4 1122 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 TCERG1O14776 1098 aaKnown RBP5.52□□□□□ -1.53
ATXN3-227ENST00000554491 AURKAO14965 403 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 NOBOXO60393 691 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 VAMP4O75379 141 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 TPM2P07951 284 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 TNNT2P45379 298 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-227ENST00000554491 MFAP1P55081 439 aaKnown RBP5.52□□□□□ -1.53
ATXN3-227ENST00000554491 SLC20A2Q08357 652 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 DPY19L1Q2PZI1 675 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 CC2D1BQ5T0F9 858 aaKnown RBP5.52□□□□□ -1.53
ATXN3-227ENST00000554491 EEF1DP3Q658K8 133 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 LZTR1Q8N653 840 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 KLHL25Q9H0H3 589 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 GULP1Q9UBP9 304 aa5.52□□□□□ -1.53
ATXN3-227ENST00000554491 IFT172Q9UG01 1749 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 CCDC144AA2RUR9 1427 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 ABCC5O15440 1437 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 TNS3Q68CZ2 1445 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 INSRRP14616 1297 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 ZXDCQ2QGD7 858 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-227ENST00000554491 GNPTABQ3T906 1256 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 CASC1Q6TDU7 716 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 CPNE8Q86YQ8 564 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 CARFQ8N187 725 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 SMARCC2Q8TAQ2 1214 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 TSPAN17Q96FV3 270 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 FGD4Q96M96 766 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 GINM1Q9NU53 330 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 WHRNQ9P202 907 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 SBF2Q86WG5 1849 aa5.51□□□□□ -1.53
ATXN3-227ENST00000554491 DAPK1P53355 1430 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms