RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 TTC39BQ5VTQ0 682 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TTLL7Q6ZT98 887 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 APTXQ7Z2E3 356 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 HDXQ7Z353 690 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RALYLQ86SE5 291 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GSPT2Q8IYD1 628 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 IGSF22Q8N9C0 903 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FBXO27Q8NI29 283 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 STAMQ92783 540 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ANAPC16Q96DE5 110 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 DNAJC7Q99615 494 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 LRRC3Q9BY71 257 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FAM204AQ9H8W3 233 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PSD3Q9NYI0 1048 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CWC15Q9P013 229 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 HDAC6Q9UBN7 1215 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CDC23Q9UJX2 597 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RAB21Q9UL25 225 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 EID1Q9Y6B2 187 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ECM29Q5VYK3 1845 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 UBN2Q6ZU65 1347 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SIPA1L3O60292 1781 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 A0A087X0B3 334 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 LOC102724159A0A0B4J2E5 919 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ESYT3A0FGR9 886 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FAM221AA4D161 298 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF213O14771 459 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GPAA1O43292 621 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 KIF5CO60282 957 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SRGAP2O75044 1071 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GYPCP04921 128 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GIPRP48546 466 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GTF2A1P52655 376 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ERVK-24P63145 666 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MORC3Q14149 939 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 UBAP2LQ14157 1087 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PWP2Q15269 919 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NKAPLQ5M9Q1 402 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 APOA5Q6Q788 366 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 DTHD1Q6ZMT9 781 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 BNC2Q6ZN30 1099 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 LYSMD3Q7Z3D4 306 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 KIAA0907Q7Z7F0 614 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM42Q8IWZ5 723 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FBXL16Q8N461 479 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 IQUBQ8NA54 791 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MSANTD4Q8NCY6 345 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NCOA7Q8NI08 942 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NECAB3Q96P71 396 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 HHIPQ96QV1 700 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SLC26A6Q9BXS9 759 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC113Q9H0I3 377 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RUBCNLQ9H714 662 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 EFCC1Q9HA90 598 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SLC52A2Q9HAB3 445 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TIMMDC1Q9NPL8 285 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PCDHB6Q9Y5E3 794 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TACC3Q9Y6A5 838 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MYO5AQ9Y4I1 1855 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ZMYM6O95789 1325 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 KDM6AO15550 1401 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FAM237AA0A1B0GTK4 181 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE9A4FU28 777 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6L9A6NEM1 432 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC85CA6NKD9 419 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MFAP3LO75121 409 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SYF2O95926 243 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 A1BGP04217 495 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 APPP05067 770 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MYBL2P10244 700 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RHOQP17081 205 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MAGEA9P43362 315 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MAP2K3P46734 347 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SARSP49591 514 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 MRPS25P82663 173 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 AKAP17AQ02040 695 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SFSWAPQ12872 951 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SQSTM1Q13501 440 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 DHX8Q14562 1220 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NTRK3Q16288 839 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 DDR2Q16832 855 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TTC31Q49AM3 519 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RNF187Q5TA31 235 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ICE2Q659A1 982 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TTBK2Q6IQ55 1244 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NFXL1Q6ZNB6 911 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RASGRP2Q7LDG7 609 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 KRT25Q7Z3Z0 450 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CD163Q86VB7 1156 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ARHGEF25Q86VW2 580 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CEP120Q8N960 986 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 JMYQ8N9B5 988 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ENOX1Q8TC92 643 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 NKD1Q969G9 470 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 EPSTI1Q96J88 318 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PANX2Q96RD6 677 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 OSMRQ99650 979 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SLF1Q9BQI6 1058 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CSRNP2Q9H175 543 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TMEM260Q9NX78 707 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms