RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NOP56O00567 594 aaKnown RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 SORBS3O60504 671 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 CYP2C9P11712 490 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 GNA11P29992 359 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 RFC2P35250 354 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 CCL23P55773 120 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 BFSP2Q13515 415 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 PTGISQ16647 500 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 GDF6Q6KF10 455 aaPredicted RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 NIPA1Q7RTP0 329 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 FAM177A1Q8N128 213 aaPredicted RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 CCDC148Q8NFR7 591 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 CAGE1Q8TC20 777 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 CRYGNQ8WXF5 182 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 HERVK_113Q902F9 699 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 PHKBQ93100 1093 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 MXRA8Q9BRK3 442 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 ALG1Q9BT22 464 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 NCOA5Q9HCD5 579 aaKnown RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 SH3GLB2Q9NR46 395 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 HDAC6Q9UBN7 1215 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
LINC00640-201ENST00000554409 GBF1Q92538 1859 aa8.6□□□□□ -1.03
LINC00640-201ENST00000554409 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 CPLX1O14810 134 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ATP9AO75110 1047 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 CYP3A4P08684 503 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 IQCF3P0C7M6 154 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ACRP10323 421 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 HOXB1P14653 301 aaPredicted RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 CHMP4BP1P59074 171 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ARHGAP4P98171 946 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 SSRP1Q08945 709 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 PTK7Q13308 1070 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 DSG2Q14126 1118 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ANKRD1Q15327 319 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 CEP55Q53EZ4 464 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ZNF365Q70YC5 407 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 BICD2Q8TD16 824 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 AFAP1L1Q8TED9 768 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 DHX38Q92620 1227 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 SCLYQ96I15 445 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 PGBD1Q96JS3 809 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 SLC26A6Q9BXS9 759 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 MTIF3Q9H2K0 278 aaKnown RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 KCNH7Q9NS40 1196 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 TMEM260Q9NX78 707 aa8.59□□□□□ -1.03
LINC00640-201ENST00000554409 ZNF215Q9UL58 517 aaPredicted RBP8.59□□□□□ -1.03
LINC00640-201ENST00000554409 EMSYQ7Z589 1322 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 STK36Q9NRP7 1315 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 IGLV3-22A0A075B6J6 115 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 GSTTP1A0A1W2PQM5 241 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 MEIS1O00470 390 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 ADAMTS3O15072 1205 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 PFKFB2O60825 505 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 DEXIO95424 95 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 FGBP02675 491 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SELPP16109 830 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 TCF7P36402 384 aaPredicted RBP8.58□□□□□ -1.04
LINC00640-201ENST00000554409 EMP3P54852 163 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SCRN1Q12765 414 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 HIC1Q14526 733 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 TRIM71Q2Q1W2 868 aaKnown RBP8.58□□□□□ -1.04
LINC00640-201ENST00000554409 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SERINC5Q86VE9 423 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 DEFB123Q8N688 67 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 CYP2W1Q8TAV3 490 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SEPT1Q8WYJ6 367 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 AGO4Q9HCK5 861 aaKnown RBP8.58□□□□□ -1.04
LINC00640-201ENST00000554409 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
LINC00640-201ENST00000554409 MTMR10Q9NXD2 777 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SLC9A2Q9UBY0 812 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 PTPRSQ13332 1948 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 KAT6AQ92794 2004 aa8.58□□□□□ -1.04
LINC00640-201ENST00000554409 SIP14410 1827 aa8.57□□□□□ -1.04
LINC00640-201ENST00000554409 WDR81Q562E7 1941 aa8.57□□□□□ -1.04
LINC00640-201ENST00000554409 C17orf102A2RUQ5 167 aa8.57□□□□□ -1.04
LINC00640-201ENST00000554409 FAM86B1E9PN63 330 aa8.57□□□□□ -1.04
LINC00640-201ENST00000554409 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms