RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 NOBOXO60393 691 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 PYGMP11217 842 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 FAHP16930 419 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 IL13P35225 146 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ST5P78524 1137 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 NFIXQ14938 502 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
ATXN3-225ENST00000554214 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ARHGAP36Q6ZRI8 547 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 C16orf59Q7L2K0 433 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ADAMTS17Q8TE56 1095 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 TMEM209Q96SK2 561 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ADAM7Q9H2U9 754 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 SLC52A2Q9HAB3 445 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 GSTA4O15217 222 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 EFCAB14O75071 495 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 EPHA5P54756 1037 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 GPR19Q15760 415 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 C2orf27AQ580R0 203 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 ZC3H7AQ8IWR0 971 aaKnown RBP7.09□□□□□ -1.27
ATXN3-225ENST00000554214 SLC7A14Q8TBB6 771 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
ATXN3-225ENST00000554214 UBXN4Q92575 508 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 MRFAP1L1Q96HT8 127 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 MAGEB10Q96LZ2 347 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-225ENST00000554214 CD244Q9BZW8 370 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 CROTQ9UKG9 612 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 PTCH2Q9Y6C5 1203 aa7.09□□□□□ -1.27
ATXN3-225ENST00000554214 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-225ENST00000554214 APPP05067 770 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 CKMP06732 381 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 PDE6AP16499 860 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 KRT15P19012 456 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 DNM2P50570 870 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 GJA9P57773 515 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 CRY1Q16526 586 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 CCDC144BQ3MJ40 725 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 BTBD8Q5XKL5 378 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 EP400NLQ6ZTU2 488 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 PROSER1Q86XN7 944 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 CADPSQ9ULU8 1353 aa7.08□□□□□ -1.28
ATXN3-225ENST00000554214 ACOT7O00154 380 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 CYP7B1O75881 506 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 AMY2AP04746 511 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 AMY2BP19961 511 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 MLLT6P55198 1093 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-225ENST00000554214 KIAA2012Q0VF49 1180 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 RTP5Q14D33 572 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 VASNQ6EMK4 673 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
ATXN3-225ENST00000554214 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 TEPSINQ96N21 525 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 PEG3Q9GZU2 1588 aa7.07□□□□□ -1.28
ATXN3-225ENST00000554214 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-225ENST00000554214 ENO2P09104 434 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-225ENST00000554214 JAM2P57087 298 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 PHF19Q5T6S3 580 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 FERMT3Q86UX7 667 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
ATXN3-225ENST00000554214 SCLYQ96I15 445 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
ATXN3-225ENST00000554214 L2HGDHQ9H9P8 463 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
ATXN3-225ENST00000554214 FAM90A27PA6NNH2 459 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 RASGRP1O95267 797 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 CYP1A1P04798 512 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-225ENST00000554214 ZNF28P17035 718 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 PFKPQ01813 784 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 UBXN11Q5T124 520 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 DTX3Q8N9I9 347 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 RIC8BQ9NVN3 520 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 ARHGEF11O15085 1522 aa7.05□□□□□ -1.28
ATXN3-225ENST00000554214 CEP164Q9UPV0 1460 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms