RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 GIMAP8Q8ND71 665 aaPredicted RBP20.46■□□□□ 0.87
SYNE2-211ENST00000553801 CUL5Q93034 780 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 C11orf84Q9BUA3 381 aaPredicted RBP20.46■□□□□ 0.87
SYNE2-211ENST00000553801 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
SYNE2-211ENST00000553801 NRCAMQ92823 1304 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 POTEB3A0JP26 581 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 C5orf67F2Z3F1 127 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 CYTH3O43739 400 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 BMPR1AP36894 532 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 ZP2Q05996 745 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 SEMA3FQ13275 785 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 TAF2Q6P1X5 1199 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 POTEBQ6S5H4 581 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 RPAINQ86UA6 219 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 NLRX1Q86UT6 975 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 TRIM50Q86XT4 487 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 ADHFE1Q8IWW8 467 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 LMBR1Q8WVP7 490 aa20.45■□□□□ 0.86
SYNE2-211ENST00000553801 WTAPQ15007 396 aa20.44■□□□□ 0.86
SYNE2-211ENST00000553801 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
SYNE2-211ENST00000553801 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
SYNE2-211ENST00000553801 ALYREFQ86V81 257 aaKnown RBP20.44■□□□□ 0.86
SYNE2-211ENST00000553801 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
SYNE2-211ENST00000553801 KCNH6Q9H252 994 aa20.44■□□□□ 0.86
SYNE2-211ENST00000553801 C19orf67A6NJJ6 358 aa20.43■□□□□ 0.86
SYNE2-211ENST00000553801 CHRNA1P02708 482 aa20.43■□□□□ 0.86
SYNE2-211ENST00000553801 SP4Q02446 784 aa20.43■□□□□ 0.86
SYNE2-211ENST00000553801 TROAPQ12815 778 aa20.43■□□□□ 0.86
SYNE2-211ENST00000553801 PCNX4Q63HM2 1172 aa20.43■□□□□ 0.86
SYNE2-211ENST00000553801 POP1Q99575 1024 aaKnown RBP20.43■□□□□ 0.86
SYNE2-211ENST00000553801 DOCK5Q9H7D0 1870 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 IGHDP01880 384 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 GHRP10912 638 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 CTC1Q2NKJ3 1217 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 NCOA7Q8NI08 942 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 CDHR1Q96JP9 859 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 EHMT1Q9H9B1 1298 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 ADGRA3Q8IWK6 1321 aa20.42■□□□□ 0.86
SYNE2-211ENST00000553801 ENPP3O14638 875 aa20.41■□□□□ 0.86
SYNE2-211ENST00000553801 LTBRP36941 435 aa20.41■□□□□ 0.86
SYNE2-211ENST00000553801 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
SYNE2-211ENST00000553801 PIBF1Q8WXW3 757 aa20.41■□□□□ 0.86
SYNE2-211ENST00000553801 CLP1Q92989 425 aaKnown RBP20.41■□□□□ 0.86
SYNE2-211ENST00000553801 RRP36Q96EU6 259 aaKnown RBP20.41■□□□□ 0.86
SYNE2-211ENST00000553801 PLVAPQ9BX97 442 aa20.41■□□□□ 0.86
SYNE2-211ENST00000553801 PIK3CDO00329 1044 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 GRM6O15303 877 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 RPLP2P05387 115 aaKnown RBP20.4■□□□□ 0.86
SYNE2-211ENST00000553801 CYP21A2P08686 494 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
SYNE2-211ENST00000553801 HYAL1Q12794 435 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 PPFIA1Q13136 1202 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 BTG3Q14201 252 aaPredicted RBP20.4■□□□□ 0.86
SYNE2-211ENST00000553801 LPIN1Q14693 890 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 SMAD2Q15796 467 aaKnown RBP20.4■□□□□ 0.86
SYNE2-211ENST00000553801 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 SEPT1Q8WYJ6 367 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 PPP2R3CQ969Q6 453 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 GPRASP2Q96D09 838 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 MAP3K14Q99558 947 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 IL25Q9H293 177 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 SENP2Q9HC62 589 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 ERAP1Q9NZ08 941 aa20.4■□□□□ 0.86
SYNE2-211ENST00000553801 TTC3P53804 2025 aa20.39■□□□□ 0.86
SYNE2-211ENST00000553801 SMARCA1P28370 1054 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 KIF5BP33176 963 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 IRS1P35568 1242 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 MGAT3Q09327 533 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 RUFY4Q6ZNE9 571 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 CTCFLQ8NI51 663 aaPredicted RBP20.39■□□□□ 0.85
SYNE2-211ENST00000553801 SPZ1Q9BXG8 430 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 RC3H2Q9HBD1 1191 aaKnown RBP20.39■□□□□ 0.85
SYNE2-211ENST00000553801 SEC63Q9UGP8 760 aaKnown RBP20.39■□□□□ 0.85
SYNE2-211ENST00000553801 TUBE1Q9UJT0 475 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 TELO2Q9Y4R8 837 aa20.39■□□□□ 0.85
SYNE2-211ENST00000553801 E7EWF7 191 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 MBTPS2O43462 519 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 LINC00271P0C7V0 271 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 SMAD4Q13485 552 aaKnown RBP20.38■□□□□ 0.85
SYNE2-211ENST00000553801 GRIK4Q16099 956 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 FBXO47Q5MNV8 452 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 TSHZ1Q6ZSZ6 1077 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 GLG1Q92896 1179 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 ZNF689Q96CS4 500 aaPredicted RBP20.38■□□□□ 0.85
SYNE2-211ENST00000553801 MFSD14AQ96MC6 490 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 LZTS2Q9BRK4 669 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 SMARCAD1Q9H4L7 1026 aa20.38■□□□□ 0.85
SYNE2-211ENST00000553801 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
SYNE2-211ENST00000553801 MEIS2O14770 477 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 MMP1P03956 469 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 MRE11P49959 708 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 CLUL1Q15846 466 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 NAALADL2Q58DX5 795 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 DNAJB3Q8WWF6 145 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 TNPO1Q92973 898 aaKnown RBP20.37■□□□□ 0.85
SYNE2-211ENST00000553801 P2RX5Q93086 422 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 IGFLR1Q9H665 355 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 CD207Q9UJ71 328 aa20.37■□□□□ 0.85
SYNE2-211ENST00000553801 CDY2AQ9Y6F7 541 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms