RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 DHX15O43143 795 aaKnown RBP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 ACTR2P61160 394 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 LETM2Q2VYF4 491 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TRIM50Q86XT4 487 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 PPP1R13LQ8WUF5 828 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TRIM43Q96BQ3 446 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TBC1D22BQ9NU19 505 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 TMEM39AQ9NV64 488 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-202ENST00000553744 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
TMEM253-202ENST00000553744 EMSYQ7Z589 1322 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 DDX39AO00148 427 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 MSH4O15457 936 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 CCNE2O96020 404 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 GJB2P29033 226 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 CUL4AQ13619 759 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 UTP14CQ5TAP6 766 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 C7orf31Q8N865 590 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 PRO3102Q9H379 93 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.25
TMEM253-202ENST00000553744 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
TMEM253-202ENST00000553744 SLC37A4O43826 429 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 CCNT1O60563 726 aaKnown RBP13.45□□□□□ -0.26
TMEM253-202ENST00000553744 LGR5O75473 907 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 ATG7O95352 703 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 RAG1P15918 1043 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 ITGB8P26012 769 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-202ENST00000553744 GDF6Q6KF10 455 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-202ENST00000553744 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-202ENST00000553744 ETNPPLQ8TBG4 499 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 PCYT2Q99447 389 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 RIT2Q99578 217 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 GDF15Q99988 308 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-202ENST00000553744 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 SMC3Q9UQE7 1217 aa13.45□□□□□ -0.26
TMEM253-202ENST00000553744 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
TMEM253-202ENST00000553744 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
TMEM253-202ENST00000553744 KRT76Q01546 638 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 PTGISQ16647 500 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 LRCH2Q5VUJ6 765 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 ABHD15Q6UXT9 468 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 SMAP1Q8IYB5 467 aaPredicted RBP13.44□□□□□ -0.26
TMEM253-202ENST00000553744 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 SNX21Q969T3 373 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
TMEM253-202ENST00000553744 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 KCNMB3Q9NPA1 279 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
TMEM253-202ENST00000553744 IGKV6D-21A0A0A0MT36 114 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 GAS7O60861 476 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 PSMD10O75832 226 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 TIMP1P01033 207 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 SMIM10L2AP0DMW4 78 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 SMIM10L2BP0DMW5 78 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 CYP2C9P11712 490 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 MARK3P27448 753 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 HOXC8P31273 242 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
TMEM253-202ENST00000553744 MIS18BP1Q6P0N0 1132 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 GLG1Q92896 1179 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 BADQ92934 168 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 GJA10Q969M2 543 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 CTAGE1Q96RT6 745 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
TMEM253-202ENST00000553744 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 NOD1Q9Y239 953 aa13.43□□□□□ -0.26
TMEM253-202ENST00000553744 C17orf102A2RUQ5 167 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 WDR64B1ANS9 1081 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 WNT7AO00755 349 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 TBX3O15119 743 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM253-202ENST00000553744 BMP8BP34820 402 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 STAT5BP51692 787 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 HIC1Q14526 733 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 FAM160B1Q5W0V3 765 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 B3GNT9Q6UX72 402 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms