RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 EPHA7Q15375 998 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
TTC8-208ENST00000553718 TRAPPC11Q7Z392 1133 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 CTAGE6Q86UF2 777 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 CTAGE4Q8IX94 777 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
TTC8-208ENST00000553718 CCDC155Q8N6L0 562 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 JAKMIP2Q96AA8 810 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 FBXL5Q9UKA1 691 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 RAB21Q9UL25 225 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
TTC8-208ENST00000553718 FAM86B1E9PN63 330 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 RAD21O60216 631 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 PSMD10O75832 226 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 FAM86B2P0C5J1 330 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 KCNA3P22001 575 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
TTC8-208ENST00000553718 JAG1P78504 1218 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 ITIH3Q06033 890 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 KCNMA1Q12791 1236 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 ADAM9Q13443 819 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
TTC8-208ENST00000553718 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 ARSHQ5FYA8 562 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 C10orf76Q5T2E6 689 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 PDXDC1Q6P996 788 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 STXBP4Q6ZWJ1 553 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 MCF2L2Q86YR7 1114 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 FMNL3Q8IVF7 1028 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 TMEM174Q8WUU8 243 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 UBE2Q2Q8WVN8 375 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 BAP1Q92560 729 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 RUBCNQ92622 972 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 LPAR1Q92633 364 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
TTC8-208ENST00000553718 RIT2Q99578 217 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
TTC8-208ENST00000553718 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 PLCB1Q9NQ66 1216 aa11.88□□□□□ -0.51
TTC8-208ENST00000553718 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
TTC8-208ENST00000553718 GTPBP10A4D1E9 387 aaKnown RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 TCP10L2B9ZVM9 353 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 MEIS1O00470 390 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 TACC1O75410 805 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 ERLIN1O75477 346 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 BAG6P46379 1132 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 HSD17B4P51659 736 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 TNFAIP1Q13829 316 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 ASTE1Q2TB18 679 aaPredicted RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 SLC9C1Q4G0N8 1177 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 B3GNT9Q6UX72 402 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 HPS3Q969F9 1004 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.51
TTC8-208ENST00000553718 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.87□□□□□ -0.51
TTC8-208ENST00000553718 SAR1BQ9Y6B6 198 aa11.87□□□□□ -0.51
TTC8-208ENST00000553718 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 V9GYY5 206 aaPredicted RBP11.87□□□□□ -0.51
TTC8-208ENST00000553718 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
TTC8-208ENST00000553718 SERPING1P05155 500 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 ICAM1P05362 532 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
TTC8-208ENST00000553718 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 PTGER2P43116 358 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 PRELPP51888 382 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
TTC8-208ENST00000553718 SF3B2Q13435 895 aaKnown RBP11.86□□□□□ -0.51
TTC8-208ENST00000553718 ALCAMQ13740 583 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 TNIP1Q15025 636 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 LRRC41Q15345 812 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 USH1GQ495M9 461 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 CIAPIN1Q6FI81 312 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 IQCEQ6IPM2 695 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
TTC8-208ENST00000553718 WDR93Q6P2C0 686 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 ZNF572Q7Z3I7 529 aaPredicted RBP11.86□□□□□ -0.51
TTC8-208ENST00000553718 CACNA2D4Q7Z3S7 1137 aa11.86□□□□□ -0.51
TTC8-208ENST00000553718 LRRN4CLQ8ND94 238 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms