RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ECEL1O95672 775 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 TMOD1P28289 359 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 MAP2K2P36507 400 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 SLC7A3Q8WY07 619 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 HAUS2Q9NVX0 235 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 IFT88Q13099 833 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 MAP7D3Q8IWC1 876 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 RXRBP28702 533 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 SLC8A1P32418 973 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 IL9RQ01113 521 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 GABPAQ06546 454 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 MED10Q9BTT4 135 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 POC1B-GALNT4F8VUJ3 575 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 SH3BP5O60239 455 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 TSGA10IPQ3SY00 556 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 ANO3Q9BYT9 981 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 NUF2Q9BZD4 464 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 CLTAP09496 248 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 NNTQ13423 1086 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 ALS2CLQ60I27 953 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 RINT1Q6NUQ1 792 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 UNC13DQ70J99 1090 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 SRP68Q9UHB9 627 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 H7C0C1 242 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 ATP5OP48047 213 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 MUM1Q2TAK8 710 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 CCDC144BQ3MJ40 725 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
ARHGEF40-202ENST00000553709 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 CDC27P30260 824 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 MXI1P50539 228 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 YWHAGP61981 247 aaKnown RBP eCLIP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 ALX1Q15699 326 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 TMED8Q6PL24 325 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 JCADQ9P266 1359 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 ARHGAP42A6NI28 874 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 CYP2D6P10635 497 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 CASP1P29466 404 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 TFDP1Q14186 410 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 ADAMTS1Q9UHI8 967 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 SGK1O00141 431 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 CASQ2O14958 399 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 FAM182BQ5T319 152 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 MAP3K21Q5TCX8 1036 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 PPP1R2P3Q6NXS1 205 aa16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 ALKBH5Q6P6C2 394 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-202ENST00000553709 SNX1Q13596 522 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 KNDC1Q76NI1 1749 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 SNAP23O00161 211 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 MAD1L1Q9Y6D9 718 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 USP14P54578 494 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 SLC7A5Q01650 507 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 EMBQ6PCB8 327 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 RFX6Q8HWS3 928 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 SYNE4Q8N205 404 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
ARHGEF40-202ENST00000553709 INHBAP08476 426 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 PRDX5P30044 214 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 KSR1Q8IVT5 923 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 EFCAB13Q8IY85 973 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 SEPT10Q9P0V9 454 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 DDIT3P35638 169 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 SNCBQ16143 134 aa16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 MRPL47Q9HD33 250 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-202ENST00000553709 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms