RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
CCNK-202ENST00000553636 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
CCNK-202ENST00000553636 ATP6V0A1Q93050 837 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 RNF26Q9BY78 433 aaPredicted RBP13.26□□□□□ -0.29
CCNK-202ENST00000553636 NKX2-4Q9H2Z4 354 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 ZNF576Q9H609 170 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 C6orf50Q9HD87 102 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 KCNH7Q9NS40 1196 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 MSRAQ9UJ68 235 aa13.26□□□□□ -0.29
CCNK-202ENST00000553636 GSTTP1A0A1W2PQM5 241 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ESYT2A0FGR8 921 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 TREHO43280 583 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ARP10275 920 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
CCNK-202ENST00000553636 IFNAR1P17181 557 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 MARK3P27448 753 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 THPOP40225 353 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ARHGAP4P98171 946 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 STK3Q13188 491 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ZNF618Q5T7W0 954 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 RASGRP4Q8TDF6 673 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 LMBR1Q8WVP7 490 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 RNPEPQ9H4A4 650 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 JPH1Q9HDC5 661 aaPredicted RBP13.25□□□□□ -0.29
CCNK-202ENST00000553636 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 SETD4Q9NVD3 440 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 VPS54Q9P1Q0 977 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 YBX2Q9Y2T7 364 aaKnown RBP13.25□□□□□ -0.29
CCNK-202ENST00000553636 KAT6AQ92794 2004 aa13.25□□□□□ -0.29
CCNK-202ENST00000553636 CPLX1O14810 134 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 MAFGO15525 162 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 NBNO60934 754 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 MYOGP15173 224 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 FOSL2P15408 326 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 HOXC8P31273 242 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 GPNMBQ14956 572 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 TRIM22Q8IYM9 498 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 GLG1Q92896 1179 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 UIMC1Q96RL1 719 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 SLC9A7Q96T83 725 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
CCNK-202ENST00000553636 SLC9A2Q9UBY0 812 aa13.24□□□□□ -0.29
CCNK-202ENST00000553636 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 FAM86B1E9PN63 330 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 DDX39AO00148 427 aaKnown RBP13.23□□□□□ -0.29
CCNK-202ENST00000553636 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
CCNK-202ENST00000553636 CTSHP09668 335 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 FAM86B2P0C5J1 330 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 GNAT1P11488 350 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 GNA11P29992 359 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 KCNJ6P48051 423 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
CCNK-202ENST00000553636 PPFIA1Q13136 1202 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
CCNK-202ENST00000553636 MBTPS1Q14703 1052 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
CCNK-202ENST00000553636 SLC28A3Q9HAS3 691 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 ERAP1Q9NZ08 941 aa13.23□□□□□ -0.29
CCNK-202ENST00000553636 NFASCO94856 1347 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 MEIS1O00470 390 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 CXCL10P02778 98 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 NLRP5P59047 1200 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 ACTR2P61160 394 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 TCTN1Q2MV58 587 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
CCNK-202ENST00000553636 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 SMARCAD1Q9H4L7 1026 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 PRDM12Q9H4Q4 367 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 SIP14410 1827 aa13.22□□□□□ -0.29
CCNK-202ENST00000553636 NRCAMQ92823 1304 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 LGR5O75473 907 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 DEXIO95424 95 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 CYP3A4P08684 503 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 ANAPC15P60006 121 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 WDR5P61964 334 aaKnown RBP13.21□□□□□ -0.29
CCNK-202ENST00000553636 IGBP1P78318 339 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 DEFB103AP81534 67 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 GRIK4Q16099 956 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 CPLX2Q6PUV4 134 aaKnown RBP13.21□□□□□ -0.29
CCNK-202ENST00000553636 NIPA1Q7RTP0 329 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
CCNK-202ENST00000553636 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
CCNK-202ENST00000553636 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms