RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GHRP10912 638 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
PRPF39-204ENST00000553605 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
PRPF39-204ENST00000553605 ZMYM1Q5SVZ6 1142 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
PRPF39-204ENST00000553605 CMTR2Q8IYT2 770 aaKnown RBP16.13■□□□□ 0.17
PRPF39-204ENST00000553605 KREMEN2Q8NCW0 462 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 MICAL1Q8TDZ2 1067 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 ATP8B4Q8TF62 1192 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 TTC14Q96N46 770 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 EHMT1Q9H9B1 1298 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 MRPL11Q9Y3B7 192 aaKnown RBP16.13■□□□□ 0.17
PRPF39-204ENST00000553605 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
PRPF39-204ENST00000553605 KRT37O76014 449 aa16.12■□□□□ 0.17
PRPF39-204ENST00000553605 TGFB3P10600 412 aa16.12■□□□□ 0.17
PRPF39-204ENST00000553605 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
PRPF39-204ENST00000553605 UBALD2Q8IYN6 164 aa16.12■□□□□ 0.17
PRPF39-204ENST00000553605 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
PRPF39-204ENST00000553605 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
PRPF39-204ENST00000553605 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 CFBP00751 764 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 MS4A1P11836 297 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
PRPF39-204ENST00000553605 ADAM17P78536 824 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 MTMR3Q13615 1198 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 LPIN1Q14693 890 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 ASTLQ6HA08 431 aaPredicted RBP16.11■□□□□ 0.17
PRPF39-204ENST00000553605 VN1R2Q8NFZ6 395 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 S1PR5Q9H228 398 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 SORCS3Q9UPU3 1222 aa16.11■□□□□ 0.17
PRPF39-204ENST00000553605 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
PRPF39-204ENST00000553605 SP100P23497 879 aaPredicted RBP16.1■□□□□ 0.17
PRPF39-204ENST00000553605 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 DGLUCYQ7Z3D6 616 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 VSIG10LQ86VR7 867 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 RMDN1Q96DB5 314 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 CDCA3Q99618 268 aaPredicted RBP16.1■□□□□ 0.17
PRPF39-204ENST00000553605 TTC3P53804 2025 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 GVINP1Q7Z2Y8 2422 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
PRPF39-204ENST00000553605 BRD1O95696 1058 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 DUSP6Q16828 381 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
PRPF39-204ENST00000553605 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
PRPF39-204ENST00000553605 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 NR2E1Q9Y466 385 aa16.09■□□□□ 0.17
PRPF39-204ENST00000553605 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
PRPF39-204ENST00000553605 DNAH14Q0VDD8 3507 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 SRGAP2BP0DMP2 458 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 HSD17B4P51659 736 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 CLCN5P51795 746 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 UBE3AQ05086 875 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 MGAT3Q09327 533 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 PGM5Q15124 567 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 TMEM184AQ6ZMB5 413 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.16
PRPF39-204ENST00000553605 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 TSHZ2Q9NRE2 1034 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 CACNA1BQ00975 2339 aa16.08■□□□□ 0.16
PRPF39-204ENST00000553605 WDR87Q6ZQQ6 2873 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 TECP42680 631 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 ALX1Q15699 326 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 FBXO47Q5MNV8 452 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 TAF2Q6P1X5 1199 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 RUFY4Q6ZNE9 571 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
PRPF39-204ENST00000553605 LINC01599Q8WXQ3 324 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 CHMP4BQ9H444 224 aaKnown RBP16.07■□□□□ 0.16
PRPF39-204ENST00000553605 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 ZNF215Q9UL58 517 aaPredicted RBP16.07■□□□□ 0.16
PRPF39-204ENST00000553605 NRCAMQ92823 1304 aa16.07■□□□□ 0.16
PRPF39-204ENST00000553605 KIAA1671Q9BY89 1806 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 OPLAHO14841 1288 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
PRPF39-204ENST00000553605 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 ERVFC1P60507 584 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 GHRHRQ02643 423 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 KCNC3Q14003 757 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 TSHZ1Q6ZSZ6 1077 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 TRIM50Q86XT4 487 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 GPR20Q99678 358 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 AGO3Q9H9G7 860 aaKnown RBP16.06■□□□□ 0.16
PRPF39-204ENST00000553605 MAP3K20Q9NYL2 800 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms