RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 LMNB1P20700 586 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 EEF1GP26641 437 aaKnown RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 JAG1P78504 1218 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 SETQ01105 290 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 FMR1Q06787 632 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 TRIM14Q14142 442 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 UBE2SQ16763 222 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 TPD52L1Q16890 204 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 CTC1Q2NKJ3 1217 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 KIF4BQ2VIQ3 1234 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 SPECC1LQ69YQ0 1117 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 ISM2Q6H9L7 571 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 UNC13DQ70J99 1090 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 KRT26Q7Z3Y9 468 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 FAM114A1Q8IWE2 563 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 LARP4BQ92615 738 aaKnown RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 RAD54LQ92698 747 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 IQCDQ96DY2 449 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 MMTAG2Q9BU76 263 aaKnown RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 EXOC1Q9NV70 894 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 PPP1R1BQ9UD71 204 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 PITPNM2Q9BZ72 1349 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 A0A087WWV3 80 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 PP2D1A8MPX8 630 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 POTECB2RU33 542 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 C19orf81C9J6K1 198 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 EDIL3O43854 480 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 KLRC4O43908 158 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 ICAM1P05362 532 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 TPM2P07951 284 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 TPM1P09493 284 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 SKILP12757 684 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 MYH1P12882 1939 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 ATP1A3P13637 1013 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 ECE1P42892 770 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 OAZ1P54368 228 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 GRB10Q13322 594 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 NR1I3Q14994 352 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 CCDC144BQ3MJ40 725 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 SUPT20HL1Q3ZLR7 823 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 USP17L6PQ6QN14 398 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 NIPA1Q7RTP0 329 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 TMC6Q7Z403 805 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 FILIP1Q7Z7B0 1213 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 SCYL3Q8IZE3 742 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 ETNPPLQ8TBG4 499 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 CACTINQ8WUQ7 758 aaKnown RBP8.16□□□□□ -1.1
ATXN3-221ENST00000553498 HAS1Q92839 578 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 NUP88Q99567 741 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-221ENST00000553498 FEZ1Q99689 392 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 SLF1Q9BQI6 1058 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 BLZF1Q9H2G9 400 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 SPON1Q9HCB6 807 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 HACL1Q9UJ83 578 aa8.16□□□□□ -1.1
ATXN3-221ENST00000553498 CDK5RAP2Q96SN8 1893 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 MYPNQ86TC9 1320 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 GOLGA6L9A6NEM1 432 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 BCRP11274 1271 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 CCNE1P24864 410 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 RPA1P27694 616 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 CDC25AP30304 524 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 ZNF76P36508 570 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 GRM5P41594 1212 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 HSD17B4P51659 736 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 ASIC1P78348 528 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 LRRC63Q05C16 580 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 TBX2Q13207 712 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 NOL9Q5SY16 702 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 XRRA1Q6P2D8 792 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 MIGA2Q7L4E1 593 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 SPICE1Q8N0Z3 855 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 GUF1Q8N442 669 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 NEK9Q8TD19 979 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 NELFBQ8WX92 580 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 KIFC2Q96AC6 838 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms