RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TRIOBPQ9H2D6 2365 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 GCFC2P16383 781 aaKnown RBP20.94■□□□□ 0.94
CPSF2-202ENST00000553427 ACTR2P61160 394 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 MDM2Q00987 491 aaPredicted RBP20.94■□□□□ 0.94
CPSF2-202ENST00000553427 KRT40Q6A162 431 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 BADQ92934 168 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 CTAGE1Q96RT6 745 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 NAP1L4Q99733 375 aaKnown RBP20.94■□□□□ 0.94
CPSF2-202ENST00000553427 HIPK3Q9H422 1215 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 HDAC6Q9UBN7 1215 aa20.94■□□□□ 0.94
CPSF2-202ENST00000553427 ATG7O95352 703 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 INF2Q27J81 1249 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 PPP4R3AQ6IN85 833 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 GDF6Q6KF10 455 aaPredicted RBP20.93■□□□□ 0.94
CPSF2-202ENST00000553427 MFSD5Q6N075 450 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 NEK8Q86SG6 692 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 TRIM50Q86XT4 487 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 DIS3L2Q8IYB7 885 aaKnown RBP20.93■□□□□ 0.94
CPSF2-202ENST00000553427 C8orf76Q96K31 380 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 SMARCAD1Q9H4L7 1026 aa20.93■□□□□ 0.94
CPSF2-202ENST00000553427 PITPNM1O00562 1244 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 MSH4O15457 936 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 TDP2O95551 362 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 CCNE2O96020 404 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 KRT76Q01546 638 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 RBL2Q08999 1139 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 NR5A1Q13285 461 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 PTGISQ16647 500 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 UTP14CQ5TAP6 766 aaKnown RBP20.92■□□□□ 0.94
CPSF2-202ENST00000553427 ZNF746Q6NUN9 644 aaPredicted RBP20.92■□□□□ 0.94
CPSF2-202ENST00000553427 PIK3AP1Q6ZUJ8 805 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 SLC5A5Q92911 643 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 RIT2Q99578 217 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 UBE2OQ9C0C9 1292 aaKnown RBP20.92■□□□□ 0.94
CPSF2-202ENST00000553427 ERAP1Q9NZ08 941 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 KIF3AQ9Y496 699 aa20.92■□□□□ 0.94
CPSF2-202ENST00000553427 IGKV6D-21A0A0A0MT36 114 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 SMIM10L2AP0DMW4 78 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 SMIM10L2BP0DMW5 78 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 CHMP4BP1P59074 171 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 FPGSQ05932 587 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 SAFBQ15424 915 aaKnown RBP eCLIP20.91■□□□□ 0.94
CPSF2-202ENST00000553427 HABP4Q5JVS0 413 aaKnown RBP20.91■□□□□ 0.94
CPSF2-202ENST00000553427 PLPPR4Q7Z2D5 763 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 SMAP1Q8IYB5 467 aaPredicted RBP20.91■□□□□ 0.94
CPSF2-202ENST00000553427 FAM184AQ8NB25 1140 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 FBXO18Q8NFZ0 1043 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 CAGE1Q8TC20 777 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 PPP1R13LQ8WUF5 828 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 PCYT2Q99447 389 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 PCDH10Q9P2E7 1040 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 NOD1Q9Y239 953 aa20.91■□□□□ 0.94
CPSF2-202ENST00000553427 BTBD18B2RXH4 712 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 CYP2C9P11712 490 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 SLC26A2P50443 739 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 LETM2Q2VYF4 491 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 EARS2Q5JPH6 523 aaKnown RBP20.9■□□□□ 0.94
CPSF2-202ENST00000553427 ABHD15Q6UXT9 468 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 TDHQ8IZJ6 230 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 TMEM199Q8N511 208 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 CCDC155Q8N6L0 562 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 ETNPPLQ8TBG4 499 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 AFAP1L1Q8TED9 768 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 GLG1Q92896 1179 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 PPP1R12CQ9BZL4 782 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 AZI2Q9H6S1 392 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 DDX25Q9UHL0 483 aaKnown RBP20.9■□□□□ 0.94
CPSF2-202ENST00000553427 TCEAL9Q9UHQ7 104 aa20.9■□□□□ 0.94
CPSF2-202ENST00000553427 C17orf102A2RUQ5 167 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 GNAT1P11488 350 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 CYP2C18P33260 490 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 PTK7Q13308 1070 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 PPIGQ13427 754 aaKnown RBP eCLIP20.89■□□□□ 0.93
CPSF2-202ENST00000553427 BFSP2Q13515 415 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 WNT8AQ9H1J5 351 aa20.89■□□□□ 0.93
CPSF2-202ENST00000553427 FOXP1Q9H334 677 aaPredicted RBP20.89■□□□□ 0.93
CPSF2-202ENST00000553427 UMODL1Q5DID0 1318 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 NRCAMQ92823 1304 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 WDR64B1ANS9 1081 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 DDX39AO00148 427 aaKnown RBP20.88■□□□□ 0.93
CPSF2-202ENST00000553427 TBX3O15119 743 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 GAS7O60861 476 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 PSMD10O75832 226 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 FOSBP53539 338 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 ADAM17P78536 824 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 HIC1Q14526 733 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 LRCH2Q5VUJ6 765 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 MIS18BP1Q6P0N0 1132 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 SERINC5Q86VE9 423 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 RDM1Q8NG50 284 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 DHX38Q92620 1227 aaKnown RBP20.88■□□□□ 0.93
CPSF2-202ENST00000553427 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 KCNMB3Q9NPA1 279 aa20.88■□□□□ 0.93
CPSF2-202ENST00000553427 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 SLC37A4O43826 429 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 STAT5BP51692 787 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 CUL4AQ13619 759 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 TRIM71Q2Q1W2 868 aaKnown RBP20.87■□□□□ 0.93
CPSF2-202ENST00000553427 FAM160B1Q5W0V3 765 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 B3GNT9Q6UX72 402 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms