RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 GNASQ5JWF2 1037 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 RNF180Q86T96 592 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 SLFN12Q8IYM2 578 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 ARRDC4Q8NCT1 418 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 C16orf70Q9BSU1 422 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 GRIN2DO15399 1336 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 DDX39AO00148 427 aaKnown RBP16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 LAD1O00515 517 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 F2P00734 622 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 ASGR1P07306 291 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 PRPHP41219 470 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 ACLYP53396 1101 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 NUCB2P80303 420 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 KRT76Q01546 638 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 TEKT3Q9BXF9 490 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
MTHFD1-204ENST00000553405 EMSYQ7Z589 1322 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 HAS3O00219 553 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 LGALS2P05162 132 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 TCF7P36402 384 aaPredicted RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.277e-7■■■■□ 22.4
MTHFD1-204ENST00000553405 SP4Q02446 784 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 DNM1Q05193 864 aaKnown RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 DGKDQ16760 1214 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 TRIM50Q86XT4 487 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 CCDC60Q8IWA6 550 aaPredicted RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 SEPT1Q8WYJ6 367 aa16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 TTC12Q9H892 705 aaPredicted RBP16.75■□□□□ 0.27
MTHFD1-204ENST00000553405 A0A1W2PQ45 241 aaPredicted RBP16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 A0A1W2PQY0 241 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 ZNF286BP0CG31 522 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 TXKP42681 527 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 SOX10P56693 466 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 GRIN1Q05586 938 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 SLC39A14Q15043 492 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 PCSK9Q8NBP7 692 aaKnown RBP16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 LINC00301Q8NCQ3 95 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 RDM1Q8NG50 284 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 PCDHA12Q9UN75 941 aa16.74■□□□□ 0.27
MTHFD1-204ENST00000553405 IGSF9BQ9UPX0 1349 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 TCHHQ07283 1943 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 POTEMA6NI47 508 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 WDR64B1ANS9 1081 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 NOP56O00567 594 aaKnown RBP16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 KPNA6O60684 536 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 STBD1O95210 358 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 BAG4O95429 457 aaKnown RBP16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 BMP15O95972 392 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 ATP4AP20648 1035 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 SFNP31947 248 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 UGCGQ16739 394 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 HSD17B14Q9BPX1 270 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 FBXO2Q9UK22 296 aaPredicted RBP16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 PCDHA10Q9Y5I2 948 aa16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 MAFBQ9Y5Q3 323 aaPredicted RBP16.73■□□□□ 0.27
MTHFD1-204ENST00000553405 CCDC85CA6NKD9 419 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 KBTBD13C9JR72 458 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 CHMP2AO43633 222 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 ZNF862O60290 1169 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 YEATS4O95619 227 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 MYL3P08590 195 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 HOXC8P31273 242 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 JAK3P52333 1124 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 SNX17Q15036 470 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 PAWRQ96IZ0 340 aaKnown RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 ALPK3Q96L96 1907 aa16.72■□□□□ 0.27
MTHFD1-204ENST00000553405 ZEB2O60315 1214 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 CABYRO75952 493 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 SPATA31C1P0DKV0 1188 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 TECP42680 631 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 PSMC6P62333 389 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 CEBPZQ03701 1054 aaKnown RBP16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 PDIA5Q14554 519 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 EPHA7Q15375 998 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 PLPPR4Q7Z2D5 763 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
MTHFD1-204ENST00000553405 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms