RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CNKSR3Q6P9H4 555 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 NIPA1Q7RTP0 329 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 TRIM50Q86XT4 487 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 KAT6AQ92794 2004 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 PHKBQ93100 1093 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 NKX2-4Q9H2Z4 354 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 TMEM260Q9NX78 707 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 PKD2L1Q9P0L9 805 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 SLC9A2Q9UBY0 812 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 YBX2Q9Y2T7 364 aaKnown RBP14.79□□□□□ -0.04
ACTN1-207ENST00000553290 TELO2Q9Y4R8 837 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 NFASCO94856 1347 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 EMSYQ7Z589 1322 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 NRCAMQ92823 1304 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 GSTTP1A0A1W2PQM5 241 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 RSPH10B2B2RC85 870 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 MEIS1O00470 390 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 TREHO43280 583 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 NBNO60934 754 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 CAND2O75155 1236 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 RSPH10BP0C881 870 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF76P36508 570 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 THPOP40225 353 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 KCNJ6P48051 423 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 RABGGTBP53611 331 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 ARHGAP4P98171 946 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 JAKMIP3Q5VZ66 844 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 CCDC148Q8NFR7 591 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 CYP2W1Q8TAV3 490 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 BICD2Q8TD16 824 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 WNT8BQ93098 351 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF274Q96GC6 653 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-207ENST00000553290 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 SLC26A6Q9BXS9 759 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 SMARCAD1Q9H4L7 1026 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 JPH1Q9HDC5 661 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-207ENST00000553290 SETD4Q9NVD3 440 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 ERAP1Q9NZ08 941 aa14.78□□□□□ -0.04
ACTN1-207ENST00000553290 ABHD14A-ACY1A0A1B0GW23 586 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 KIF28PB7ZC32 967 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 EFCAB14O75071 495 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 CCT2P78371 535 aaKnown RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 ADAM17P78536 824 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 TRIM22Q8IYM9 498 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 REXO1Q8N1G1 1221 aaKnown RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 MAFAQ8NHW3 353 aaPredicted RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 GLG1Q92896 1179 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 GAS2L1Q99501 681 aaPredicted RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 NCOA5Q9HCD5 579 aaKnown RBP14.77□□□□□ -0.05
ACTN1-207ENST00000553290 SH3GLB2Q9NR46 395 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 EYSQ5T1H1 3165 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 A0A0C4DFX4 3053 aa14.77□□□□□ -0.05
ACTN1-207ENST00000553290 MYO9BQ13459 2157 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
ACTN1-207ENST00000553290 LGR5O75473 907 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 CYP3A4P08684 503 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 ARP10275 920 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 WDR5P61964 334 aaKnown RBP14.76□□□□□ -0.05
ACTN1-207ENST00000553290 IKBKEQ14164 716 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 MBTPS1Q14703 1052 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 PPP2R2DQ66LE6 453 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 HERC6Q8IVU3 1022 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 LMBR1Q8WVP7 490 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 CRYGNQ8WXF5 182 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 TNPO1Q92973 898 aaKnown RBP14.76□□□□□ -0.05
ACTN1-207ENST00000553290 AZI2Q9H6S1 392 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 AGO4Q9HCK5 861 aaKnown RBP14.76□□□□□ -0.05
ACTN1-207ENST00000553290 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
ACTN1-207ENST00000553290 CPLX1O14810 134 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 MYOGP15173 224 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 ANAPC15P60006 121 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 ACTR2P61160 394 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 SSRP1Q08945 709 aaKnown RBP14.75□□□□□ -0.05
ACTN1-207ENST00000553290 PPFIA1Q13136 1202 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 CPLX2Q6PUV4 134 aaKnown RBP14.75□□□□□ -0.05
ACTN1-207ENST00000553290 PLA2G4DQ86XP0 818 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 PRDM12Q9H4Q4 367 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
ACTN1-207ENST00000553290 FAM86B1E9PN63 330 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 PPFIA3O75145 1194 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 ATG7O95352 703 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 DEXIO95424 95 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 FAM86B2P0C5J1 330 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 MARK3P27448 753 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-207ENST00000553290 ITGB3BPQ13352 177 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-207ENST00000553290 GRIK4Q16099 956 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 TAF2Q6P1X5 1199 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 PLPPR4Q7Z2D5 763 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 RPAINQ86UA6 219 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 PCYT2Q99447 389 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 VPS54Q9P1Q0 977 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 PRUNE2Q8WUY3 3088 aa14.74□□□□□ -0.05
ACTN1-207ENST00000553290 UNC80Q8N2C7 3258 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 IGLV3-22A0A075B6J6 115 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 RRN3P2A6NIE6 340 aa14.73□□□□□ -0.05
ACTN1-207ENST00000553290 IPO5O00410 1097 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms