RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 BFSP2Q13515 415 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 TRIM71Q2Q1W2 868 aaKnown RBP21.38■■□□□ 1.01
HDAC4-217ENST00000553145 RASIP1Q5U651 963 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 BLIDQ8IZY5 108 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 DAGLBQ8NCG7 672 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 UIMC1Q96RL1 719 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 PCYT2Q99447 389 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 RNPEPQ9H4A4 650 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 ZNF215Q9UL58 517 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-217ENST00000553145 KCNJ14Q9UNX9 436 aa21.38■■□□□ 1.01
HDAC4-217ENST00000553145 C17orf102A2RUQ5 167 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 FDPSP14324 419 aaKnown RBP21.37■■□□□ 1.01
HDAC4-217ENST00000553145 CIITAP33076 1130 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 RBL2Q08999 1139 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 PTK7Q13308 1070 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 RETREG2Q8NC44 543 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 CAGE1Q8TC20 777 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 LENG9Q96B70 501 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 SDF4Q9BRK5 362 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 PHF20Q9BVI0 1012 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 C22orf23Q9BZE7 217 aa21.37■■□□□ 1.01
HDAC4-217ENST00000553145 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-217ENST00000553145 TRIP12Q14669 1992 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-217ENST00000553145 EMSYQ7Z589 1322 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 DDX39AO00148 427 aaKnown RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 DHX15O43143 795 aaKnown RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 LGR5O75473 907 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 CCNE2O96020 404 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 ACTR2P61160 394 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 FAM109BQ6ICB4 259 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 GPR153Q6NV75 609 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 Q7L0L9 218 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 DEFB128Q7Z7B8 93 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 SERINC5Q86VE9 423 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 FAM177A1Q8N128 213 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 NSUN7Q8NE18 718 aaKnown RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 HERVK_113Q902F9 699 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 SETD4Q9NVD3 440 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 CXXC1Q9P0U4 656 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-217ENST00000553145 SZT2Q5T011 3432 aa21.36■■□□□ 1.01
HDAC4-217ENST00000553145 TREHO43280 583 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 FGBP02675 491 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 CKBP12277 381 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 MARK3P27448 753 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 RBM25P49756 843 aaKnown RBP21.35■■□□□ 1.01
HDAC4-217ENST00000553145 SETQ01105 290 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-217ENST00000553145 GPNMBQ14956 572 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 PRR16Q569H4 304 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 TRAF7Q6Q0C0 670 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 LRRC8DQ7L1W4 858 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 OTOP2Q7RTS6 562 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 TBCKQ8TEA7 893 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 AFAP1L1Q8TED9 768 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 ATP6V0A1Q93050 837 aa21.35■■□□□ 1.01
HDAC4-217ENST00000553145 IPO5O00410 1097 aaKnown RBP21.34■■□□□ 1.01
HDAC4-217ENST00000553145 JAK2O60674 1132 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 SELPP16109 830 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 RFC2P35250 354 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 ADAM17P78536 824 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 SMAD3P84022 425 aaKnown RBP21.34■■□□□ 1.01
HDAC4-217ENST00000553145 GALNT17Q6IS24 598 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 RPUSD2Q8IZ73 545 aaKnown RBP21.34■■□□□ 1.01
HDAC4-217ENST00000553145 LMBR1Q8WVP7 490 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 GLG1Q92896 1179 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 ZNF577Q9BSK1 485 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 SMARCAD1Q9H4L7 1026 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 ERAP1Q9NZ08 941 aa21.34■■□□□ 1.01
HDAC4-217ENST00000553145 ATG7O95352 703 aa21.33■■□□□ 1.01
HDAC4-217ENST00000553145 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
HDAC4-217ENST00000553145 OXER1Q8TDS5 423 aa21.33■■□□□ 1.01
HDAC4-217ENST00000553145 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
HDAC4-217ENST00000553145 GRXCR1A8MXD5 290 aa21.32■■□□□ 1
HDAC4-217ENST00000553145 TDP2O95551 362 aa21.32■■□□□ 1
HDAC4-217ENST00000553145 PFKMP08237 780 aa21.32■■□□□ 1
HDAC4-217ENST00000553145 USP11P51784 963 aa21.32■■□□□ 1
HDAC4-217ENST00000553145 DEFB123Q8N688 67 aa21.32■■□□□ 1
HDAC4-217ENST00000553145 IGKV6D-21A0A0A0MT36 114 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.31■■□□□ 1
HDAC4-217ENST00000553145 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.31■■□□□ 1
HDAC4-217ENST00000553145 MSH4O15457 936 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 NBNO60934 754 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 XBP1P17861 261 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 PPFIA1Q13136 1202 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 MBTPS1Q14703 1052 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 NONOQ15233 471 aaKnown RBP eCLIP21.31■■□□□ 1
HDAC4-217ENST00000553145 ABHD15Q6UXT9 468 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 KRT25Q7Z3Z0 450 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 WASF1Q92558 559 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 AZI2Q9H6S1 392 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 TBC1D22BQ9NU19 505 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 TET1Q8NFU7 2136 aa21.31■■□□□ 1
HDAC4-217ENST00000553145 NRCAMQ92823 1304 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 GNAT1P11488 350 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 THPOP40225 353 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 STAT5BP51692 787 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 PLCB4Q15147 1175 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 GRIK4Q16099 956 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 INF2Q27J81 1249 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 TCTN1Q2MV58 587 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms