RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 ANKRD7Q92527 254 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 SLC5A5Q92911 643 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 CCDC42Q96M95 316 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 RIT2Q99578 217 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 MRPL44Q9H9J2 332 aaKnown RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 NFKBIEO00221 500 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ALAS1P13196 640 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 PTGER2P43116 358 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 HSD17B4P51659 736 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ERVK-24P63145 666 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 JAG1P78504 1218 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 CDK17Q00537 523 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 CKAP4Q07065 602 aaKnown RBP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 LRRC41Q15345 812 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ECM1Q16610 540 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 MEA1Q16626 185 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 XRRA1Q6P2D8 792 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 HS2ST1Q7LGA3 356 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 MIER3Q7Z3K6 550 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 LENG9Q96B70 501 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ALS2CR12Q96Q35 445 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 BHMT2Q9H2M3 363 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 TBC1D7Q9P0N9 293 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 HACL1Q9UJ83 578 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.61
CNOT2-243ENST00000553078 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
CNOT2-243ENST00000553078 ATAD5Q96QE3 1844 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 FER1L6Q2WGJ9 1857 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 EIF3CLB5ME19 914 aaKnown RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 MEIS1O00470 390 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 PDXKO00764 312 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 OPLAHO14841 1288 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 NR2F2P24468 414 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 JAK3P52333 1124 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 KIF5AQ12840 1032 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 ADAM9Q13443 819 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 GIT2Q14161 759 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 MTF1Q14872 753 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 ELF2Q15723 593 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 WHAMMP3Q1A5X7 153 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 LRRC55Q6ZSA7 311 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 GJA10Q969M2 543 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 EIF3CQ99613 913 aaKnown RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 REEP2Q9BRK0 252 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 TIPINQ9BVW5 301 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 MAF1Q9H063 256 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 OLFML3Q9NRN5 406 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 CEP72Q9P209 647 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 ARMCX3Q9UH62 379 aaPredicted RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 MRFAP1Q9Y605 127 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
CNOT2-243ENST00000553078 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
CNOT2-243ENST00000553078 IGLV3-22A0A075B6J6 115 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 SHTN1A0MZ66 631 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 IPO5O00410 1097 aaKnown RBP11.25□□□□□ -0.61
CNOT2-243ENST00000553078 AKR1B10O60218 316 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 PSMD10O75832 226 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
CNOT2-243ENST00000553078 VCAM1P19320 739 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 SFNP31947 248 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 OAZ1P54368 228 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
CNOT2-243ENST00000553078 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
CNOT2-243ENST00000553078 RASSF7Q02833 373 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
CNOT2-243ENST00000553078 MTMR2Q13614 643 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms