RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 TDP2O95551 362 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 CD4P01730 458 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 GJB2P29033 226 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 PSEN2P49810 448 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 MFSD10Q14728 455 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 PPP4R3AQ6IN85 833 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 SEPT1Q8WYJ6 367 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 SNX21Q969T3 373 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 TBC1D22BQ9NU19 505 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 TCEAL9Q9UHQ7 104 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 TBX21Q9UL17 535 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 ZMYND8Q9ULU4 1186 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 EVPLQ92817 2033 aa13.28□□□□□ -0.28
TRAFD1-209ENST00000552896 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 H3BRB1 525 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 KIAA0355O15063 1070 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 MSH4O15457 936 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 B4GALT4O60513 344 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 ACTR2P61160 394 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 KRT76Q01546 638 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 GUCY1B3Q02153 619 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 KIAA0753Q2KHM9 967 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 LETM2Q2VYF4 491 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 TRIM50Q86XT4 487 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 ETNPPLQ8TBG4 499 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 SLC5A5Q92911 643 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 RIT2Q99578 217 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 TUT1Q9H6E5 874 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 PRDM5Q9NQX1 630 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.29
TRAFD1-209ENST00000552896 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 SLC37A4O43826 429 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 LGR5O75473 907 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 CCNE2O96020 404 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 SYN1P17600 705 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 NOSTRINQ8IVI9 506 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
TRAFD1-209ENST00000552896 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TBX3O15119 743 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 GAS7O60861 476 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 PSMD10O75832 226 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 ATG7O95352 703 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 HOXC8P31273 242 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 GNL2Q13823 731 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 LRCH2Q5VUJ6 765 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 HSCBQ8IWL3 235 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TRPV6Q9H1D0 765 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 SMARCAD1Q9H4L7 1026 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 AZI2Q9H6S1 392 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 ERAP1Q9NZ08 941 aa13.25□□□□□ -0.29
TRAFD1-209ENST00000552896 IGSF9BQ9UPX0 1349 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 WDR64B1ANS9 1081 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 SFNP31947 248 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 SLC26A2P50443 739 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 JAK3P52333 1124 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 CHMP4BP1P59074 171 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 ORC2Q13416 577 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 FAM160B1Q5W0V3 765 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 ABHD15Q6UXT9 468 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 GLG1Q92896 1179 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms