RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CEP131Q9UPN4 1083 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 PPME1Q9Y570 386 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 A0A1W2PPC1 479 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 BACH1O14867 736 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 ADCY6O43306 1168 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 NEMFO60524 1076 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 ATG7O95352 703 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 LGALS2P05162 132 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 TCF7P36402 384 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 PSEN2P49810 448 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 STAT5BP51692 787 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 TLE2Q04725 743 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 MFSD10Q14728 455 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 NPY5RQ15761 445 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 LRRC26Q2I0M4 334 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 KIAA0753Q2KHM9 967 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 MCTP1Q6DN14 999 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 TAF2Q6P1X5 1199 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 TMEM199Q8N511 208 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 ERMNQ8TAM6 284 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 COPS5Q92905 334 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 MTIF3Q9H2K0 278 aaKnown RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 NRBP2Q9NSY0 501 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 SAMM50Q9Y512 469 aa11.59□□□□□ -0.55
TRAFD1-208ENST00000552890 MYADML2A6NDP7 307 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 HAS3O00219 553 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 HBP1O60381 514 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 PQBP1O60828 265 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 PFKMP08237 780 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 ARP10275 920 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 RAG1P15918 1043 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 RFC2P35250 354 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 ACTR2P61160 394 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 CDC42EP1Q00587 391 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 CALCRLQ16602 461 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 TRIM60Q495X7 471 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 C7orf61Q8IZ16 206 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 KCTD17Q8N5Z5 321 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 AFAP1L1Q8TED9 768 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 PGBD1Q96JS3 809 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 CEP290O15078 2479 aa11.58□□□□□ -0.56
TRAFD1-208ENST00000552890 COL1A2P08123 1366 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 C17orf102A2RUQ5 167 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 MSH4O15457 936 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 ATP9AO75110 1047 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 LGR5O75473 907 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 MUTP22033 750 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 NR5A1Q13285 461 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 PTK7Q13308 1070 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 PPIGQ13427 754 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 ABHD15Q6UXT9 468 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 FAM126BQ8IXS8 530 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 CYP2W1Q8TAV3 490 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 C16orf70Q9BSU1 422 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 KCNMB3Q9NPA1 279 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 GTF2IRD1Q9UHL9 959 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 ATP6V1DQ9Y5K8 247 aa11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-208ENST00000552890 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 SCN10AQ9Y5Y9 1956 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 IGKV6D-21A0A0A0MT36 114 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 MAGEB2O15479 319 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 PSMD10O75832 226 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 TIMP1P01033 207 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 CD4P01730 458 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 TMOD1P28289 359 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 BMP8BP34820 402 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 SP4Q02446 784 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ST3GAL1Q11201 340 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ITGB3BPQ13352 177 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 PTGISQ16647 500 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ZNF484Q5JVG2 852 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 TTC38Q5R3I4 469 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
TRAFD1-208ENST00000552890 ATL3Q6DD88 541 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms