RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 IGSF9Q9P2J2 1179 aa10.31□□□□□ -0.76
PRKCH-203ENST00000552875 FBXO4Q9UKT5 387 aa10.31□□□□□ -0.76
PRKCH-203ENST00000552875 RAB23Q9ULC3 237 aa10.31□□□□□ -0.76
PRKCH-203ENST00000552875 LHX6Q9UPM6 363 aa10.31□□□□□ -0.76
PRKCH-203ENST00000552875 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-203ENST00000552875 NFIBO00712 420 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 PRKAB2O43741 272 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 MBD4O95243 580 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 GNAI2P04899 355 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 DCNP07585 359 aaKnown RBP10.3□□□□□ -0.76
PRKCH-203ENST00000552875 RASA1P20936 1047 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 PAN2Q504Q3 1202 aaKnown RBP10.3□□□□□ -0.76
PRKCH-203ENST00000552875 IL31Q6EBC2 164 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 CTR9Q6PD62 1173 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 UNQ6494/PRO21346Q6UXR6 183 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 SLC30A10Q6XR72 485 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 THNSL1Q8IYQ7 743 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 EPC1Q9H2F5 836 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 TBC1D17Q9HA65 648 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 TMEM260Q9NX78 707 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 LZTS1Q9Y250 596 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 MYH8P13535 1937 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 ATG2AQ2TAZ0 1938 aa10.3□□□□□ -0.76
PRKCH-203ENST00000552875 FGF18O76093 207 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 CFHP08603 1231 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 MCCP23508 829 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 ERVFC1P60507 584 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 SNAP25P60880 206 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 RPS6P62753 249 aaKnown RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 BMS1Q14692 1282 aaKnown RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 STXBP2Q15833 593 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 FAM26DQ5JW98 314 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 PLPP4Q5VZY2 271 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 RCSD1Q6JBY9 416 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 KIAA1841Q6NSI8 718 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 KDF1Q8NAX2 398 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 TCF25Q9BQ70 676 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 CCDC8Q9H0W5 538 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 KCNK12Q9HB15 430 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
PRKCH-203ENST00000552875 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
PRKCH-203ENST00000552875 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 TCRBV5S4A2TA0A5A2 114 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 FSCN2O14926 492 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 TREHO43280 583 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 LRP3O75074 770 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
PRKCH-203ENST00000552875 GHRP10912 638 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 CCDC149Q6ZUS6 474 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 DZANK1Q9NVP4 752 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 ZSCAN32Q9NX65 697 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
PRKCH-203ENST00000552875 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
PRKCH-203ENST00000552875 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 H3BRB1 525 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 TSPY3P0CV98 308 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 TSPY8P0CW00 308 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 SMIM10L2AP0DMW4 78 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 SMIM10L2BP0DMW5 78 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 KRT17Q04695 432 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 RING1Q06587 406 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 HIC1Q14526 733 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 N4BP2L1Q5TBK1 243 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-203ENST00000552875 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 RASGRP2Q7LDG7 609 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 SHDQ96IW2 340 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 IWS1Q96ST2 819 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 RANBP17Q9H2T7 1088 aaKnown RBP10.27□□□□□ -0.77
PRKCH-203ENST00000552875 TUT1Q9H6E5 874 aaKnown RBP10.27□□□□□ -0.77
PRKCH-203ENST00000552875 SPATA6Q9NWH7 488 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-203ENST00000552875 CDH22Q9UJ99 828 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 DDX41Q9UJV9 622 aaKnown RBP10.27□□□□□ -0.77
PRKCH-203ENST00000552875 CA14Q9ULX7 337 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 HCFC2Q9Y5Z7 792 aa10.27□□□□□ -0.77
PRKCH-203ENST00000552875 ARP10275 920 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-203ENST00000552875 TGM1P22735 817 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 HOXC8P31273 242 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 CSTF1Q05048 431 aaKnown RBP10.26□□□□□ -0.77
PRKCH-203ENST00000552875 SPEM2Q0P670 501 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 SBK1Q52WX2 424 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 RARS2Q5T160 578 aaKnown RBP10.26□□□□□ -0.77
PRKCH-203ENST00000552875 KCNV1Q6PIU1 500 aa10.26□□□□□ -0.77
PRKCH-203ENST00000552875 TMC7Q7Z402 723 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms