RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
CKAP4-202ENST00000552828 TELO2Q9Y4R8 837 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 CTSHP09668 335 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 GJD3Q8N144 294 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 MAP4K1Q92918 833 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
CKAP4-202ENST00000552828 HCN4Q9Y3Q4 1203 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 SIP14410 1827 aa13.64□□□□□ -0.23
CKAP4-202ENST00000552828 DDAH1O94760 285 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 CHRNA1P02708 482 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
CKAP4-202ENST00000552828 KIF5BP33176 963 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 ARHGAP4P98171 946 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 GPM6BQ13491 265 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 PTCRAQ6ISU1 281 aaPredicted RBP13.63□□□□□ -0.23
CKAP4-202ENST00000552828 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 NLRX1Q86UT6 975 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 BANK1Q8NDB2 785 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 SMARCC2Q8TAQ2 1214 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 CUL5Q93034 780 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
CKAP4-202ENST00000552828 EHMT1Q9H9B1 1298 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
CKAP4-202ENST00000552828 C5orf67F2Z3F1 127 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 UPP2O95045 317 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 RB1P06400 928 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 LINC00271P0C7V0 271 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 KCNA2P16389 499 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 UTP14CQ5TAP6 766 aaKnown RBP13.62□□□□□ -0.23
CKAP4-202ENST00000552828 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
CKAP4-202ENST00000552828 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
CKAP4-202ENST00000552828 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 RC3H2Q9HBD1 1191 aaKnown RBP13.62□□□□□ -0.23
CKAP4-202ENST00000552828 MICAL3Q7RTP6 2002 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 PIEZO1Q92508 2521 aa13.62□□□□□ -0.23
CKAP4-202ENST00000552828 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 MBLAC1A4D2B0 266 aaPredicted RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 NCK2O43639 380 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 ATP9AO75110 1047 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 IL9P15248 144 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 ITGB5P18084 799 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 GNAQP50148 359 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 MGAT3Q09327 533 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 MARCH8Q5T0T0 291 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 RUFY4Q6ZNE9 571 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 FIBCD1Q8N539 461 aa13.61□□□□□ -0.23
CKAP4-202ENST00000552828 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 NSUN3Q9H649 340 aaKnown RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
CKAP4-202ENST00000552828 FAM86C2PA6NEL3 165 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 PRR33A8MZF0 331 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 H3BQ06 376 aaPredicted RBP13.6□□□□□ -0.23
CKAP4-202ENST00000552828 ENPP3O14638 875 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 MAFGO15525 162 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 ALADP13716 330 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 BMPR1AP36894 532 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 PPFIA1Q13136 1202 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 LPIN1Q14693 890 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 CTC1Q2NKJ3 1217 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
CKAP4-202ENST00000552828 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
CKAP4-202ENST00000552828 MYL10Q9BUA6 226 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 LSG1Q9H089 658 aaKnown RBP13.6□□□□□ -0.23
CKAP4-202ENST00000552828 LMAN2LQ9H0V9 348 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 PRKAG3Q9UGI9 489 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 UBIAD1Q9Y5Z9 338 aa13.6□□□□□ -0.23
CKAP4-202ENST00000552828 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 RPLP2P05387 115 aaKnown RBP13.59□□□□□ -0.23
CKAP4-202ENST00000552828 GHRP10912 638 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 LTBRP36941 435 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 LIFRP42702 1097 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 SP4Q02446 784 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 GRIK4Q16099 956 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 FBXO47Q5MNV8 452 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
CKAP4-202ENST00000552828 RSPH3Q86UC2 560 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms