RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
CNOT2-239ENST00000552483 MAFGO15525 162 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 CYP2C9P11712 490 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 USP11P51784 963 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
CNOT2-239ENST00000552483 GDF6Q6KF10 455 aaPredicted RBP12.34□□□□□ -0.43
CNOT2-239ENST00000552483 WNT8BQ93098 351 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 C8orf76Q96K31 380 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 GDF15Q99988 308 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
CNOT2-239ENST00000552483 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
CNOT2-239ENST00000552483 CYP3A7-CYP3A51PA0A087WV96 503 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
CNOT2-239ENST00000552483 LGR5O75473 907 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 CYP3A7P24462 503 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 GJB2P29033 226 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 MCM2P49736 904 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 ACTR2P61160 394 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 SETQ01105 290 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-239ENST00000552483 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 Q4G0T1 1027 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 NFRKBQ6P4R8 1299 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-239ENST00000552483 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 DHX38Q92620 1227 aaKnown RBP12.33□□□□□ -0.44
CNOT2-239ENST00000552483 BADQ92934 168 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 ZNF577Q9BSK1 485 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 NOC4LQ9BVI4 516 aaKnown RBP12.33□□□□□ -0.44
CNOT2-239ENST00000552483 GTF2IRD1Q9UHL9 959 aa12.33□□□□□ -0.44
CNOT2-239ENST00000552483 H3BRB1 525 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 TLR3O15455 904 aaKnown RBP12.32□□□□□ -0.44
CNOT2-239ENST00000552483 ATG7O95352 703 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 SMIM10L2AP0DMW4 78 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 SMIM10L2BP0DMW5 78 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 MARK3P27448 753 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 HOXC8P31273 242 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 CYP2C18P33260 490 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 EPHB4P54760 987 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 PTPN11Q06124 597 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-239ENST00000552483 CUL4AQ13619 759 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 CCDC60Q8IWA6 550 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-239ENST00000552483 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 ETNPPLQ8TBG4 499 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 SLC5A5Q92911 643 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 WNT8AQ9H1J5 351 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 RNPEPQ9H4A4 650 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 TUT1Q9H6E5 874 aaKnown RBP12.32□□□□□ -0.44
CNOT2-239ENST00000552483 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
CNOT2-239ENST00000552483 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
CNOT2-239ENST00000552483 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 PSMD10O75832 226 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 TRIM29Q14134 588 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 B3GNT9Q6UX72 402 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 ZBTB10Q96DT7 871 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 KATNAL1Q9BW62 490 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 UNC45AQ9H3U1 944 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 KCNMB3Q9NPA1 279 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 TET1Q8NFU7 2136 aa12.31□□□□□ -0.44
CNOT2-239ENST00000552483 CHMP2AO43633 222 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
CNOT2-239ENST00000552483 TIMP1P01033 207 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 RAG1P15918 1043 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 ATP4AP20648 1035 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 CCL23P55773 120 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 ADAM17P78536 824 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 PLCB4Q15147 1175 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 PTGISQ16647 500 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 TRIM71Q2Q1W2 868 aaKnown RBP12.3□□□□□ -0.44
CNOT2-239ENST00000552483 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 HAS1Q92839 578 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 SCLYQ96I15 445 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 SEZ6LQ9BYH1 1024 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 SETD4Q9NVD3 440 aa12.3□□□□□ -0.44
CNOT2-239ENST00000552483 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 EVPLQ92817 2033 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
CNOT2-239ENST00000552483 EML1O00423 815 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 TREHO43280 583 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 NBR1Q14596 966 aa12.29□□□□□ -0.44
CNOT2-239ENST00000552483 UGCGQ16739 394 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms