RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TBC1D22BQ9NU19 505 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 HDAC6Q9UBN7 1215 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 ACTR2P61160 394 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 PTGISQ16647 500 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 LETM2Q2VYF4 491 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 NEK8Q86SG6 692 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 DIS3L2Q8IYB7 885 aaKnown RBP20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 UIMC1Q96RL1 719 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 GTF2IRD1Q9UHL9 959 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 TELO2Q9Y4R8 837 aa20.95■□□□□ 0.94
PRPF40B-216ENST00000552301 GSTTP1A0A1W2PQM5 241 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 CD2BP2O95400 341 aaKnown RBP20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 CYP2C9P11712 490 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 BMP8BP34820 402 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 FPGSQ05932 587 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 MOXD1Q6UVY6 613 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 CCDC155Q8N6L0 562 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 NAP1L4Q99733 375 aaKnown RBP20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 SMARCAD1Q9H4L7 1026 aa20.94■□□□□ 0.94
PRPF40B-216ENST00000552301 TRIOBPQ9H2D6 2365 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 TDP2O95551 362 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 GCFC2P16383 781 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 ITGB8P26012 769 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 GUCY1B3Q02153 619 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 NR5A1Q13285 461 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 GNL2Q13823 731 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 GDF6Q6KF10 455 aaPredicted RBP20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 TMEM199Q8N511 208 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 LENG9Q96B70 501 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 NOC4LQ9BVI4 516 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 ERAP1Q9NZ08 941 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 DDX25Q9UHL0 483 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 EMSYQ7Z589 1322 aa20.93■□□□□ 0.94
PRPF40B-216ENST00000552301 A0A1W2PPC1 479 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 C17orf102A2RUQ5 167 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 BACH1O14867 736 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 GAS7O60861 476 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 SMIM10L2AP0DMW4 78 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 SMIM10L2BP0DMW5 78 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 GNAT1P11488 350 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 MARK3P27448 753 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 CYP2C18P33260 490 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 KRT76Q01546 638 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 PPIGQ13427 754 aaKnown RBP eCLIP20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 BFSP2Q13515 415 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 Q4G0T1 1027 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 MFSD5Q6N075 450 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 MIS18BP1Q6P0N0 1132 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 RETREG2Q8NC44 543 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 PRO3102Q9H379 93 aa20.92■□□□□ 0.94
PRPF40B-216ENST00000552301 DNAH12Q6ZR08 3092 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 CYP3A7-CYP3A51PA0A087WV96 503 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 BTBD18B2RXH4 712 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 MSH4O15457 936 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 CYP3A7P24462 503 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 LRCH2Q5VUJ6 765 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 FAM160B1Q5W0V3 765 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 ZNF746Q6NUN9 644 aaPredicted RBP20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 TDHQ8IZJ6 230 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 TEKT3Q9BXF9 490 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 SAMM50Q9Y512 469 aa20.91■□□□□ 0.94
PRPF40B-216ENST00000552301 DHX15O43143 795 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 EDIL3O43854 480 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 MARCH6O60337 910 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 CCNT1O60563 726 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 LGR5O75473 907 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 CCNE2O96020 404 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 HABP4Q5JVS0 413 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 SMAP1Q8IYB5 467 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 CAGE1Q8TC20 777 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 TNPO1Q92973 898 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 ATP6V0A1Q93050 837 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 RIT2Q99578 217 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 SMC3Q9UQE7 1217 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 KAT6AQ92794 2004 aa20.9■□□□□ 0.94
PRPF40B-216ENST00000552301 UMODL1Q5DID0 1318 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 WDR64B1ANS9 1081 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 STAT5BP51692 787 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 CCL23P55773 120 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 PPFIA1Q13136 1202 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 PPP4R3AQ6IN85 833 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 SLC5A5Q92911 643 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 TNFRSF25Q93038 417 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 MBOAT7Q96N66 472 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 TRPC6Q9Y210 931 aa20.89■□□□□ 0.93
PRPF40B-216ENST00000552301 FAM205CA6NFA0 338 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PITPNM1O00562 1244 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 CHMP2AO43633 222 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 ATG7O95352 703 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PSAPP07602 524 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 CSF2RAP15509 400 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 SLC26A2P50443 739 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PTK7Q13308 1070 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 EARS2Q5JPH6 523 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PLPPR4Q7Z2D5 763 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PCYT2Q99447 389 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 ZNF302Q9NR11 478 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms