RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TNNC1P63316 161 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 STK4Q13043 487 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 GRB10Q13322 594 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 AP3B2Q13367 1082 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 ASTE1Q2TB18 679 aaPredicted RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 DNAJC21Q5F1R6 531 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SPDYCQ5MJ68 293 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 EMC10Q5UCC4 262 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SFMBT2Q5VUG0 894 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 TBC1D9BQ66K14 1250 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 C8orf74Q6P047 294 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 PADI6Q6TGC4 694 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 LRRC55Q6ZSA7 311 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CREG2Q8IUH2 290 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 TEX11Q8IYF3 940 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 STAG2Q8N3U4 1231 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 ARFGAP2Q8N6H7 521 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 KIAA0895Q8NCT3 520 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 C3orf20Q8ND61 904 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SPATA4Q8NEY3 305 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 ERMNQ8TAM6 284 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 TBCKQ8TEA7 893 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 PPM1EQ8WY54 764 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CUL5Q93034 780 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 OSBPL9Q96SU4 736 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 MMS19Q96T76 1030 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 MMTAG2Q9BU76 263 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 PLCB1Q9NQ66 1216 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 BLOC1S4Q9NUP1 217 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 AGPAT5Q9NUQ2 364 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 GOLGA6AQ9NYA3 693 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 FEZ2Q9UHY8 353 aaPredicted RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 GGA2Q9UJY4 613 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 INTUQ9ULD6 942 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SYNPO2Q9UMS6 1093 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 STX8Q9UNK0 236 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 RTCBQ9Y3I0 505 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 UBE4BO95155 1302 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 ZC3H4Q9UPT8 1303 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 ZNF646O15015 1829 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 LTBP4Q8N2S1 1624 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 COL2A1P02458 1487 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 IGKV6D-41A0A0C4DH26 115 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 PNMA6FA0A0J9YX94 578 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 FRMD3A2A2Y4 597 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 GTPBP10A4D1E9 387 aaKnown RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC188H7C350 402 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 TRIM37O94972 964 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 PDHBP11177 359 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 MUTP22033 750 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 TM4SF1P30408 202 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 TECP42680 631 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 BTDP43251 543 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 CLK2P49760 499 aaKnown RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 USP11P51784 963 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 CORO7P57737 925 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 CUL1Q13616 776 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 SLC18A3Q16572 532 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 NFIL3Q16649 462 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ZCWPW2Q504Y3 356 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 FAM26FQ5R3K3 315 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 LRIG3Q6UXM1 1119 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 MICALCLQ6ZW33 695 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 B4GALNT4Q76KP1 1039 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 VPS36Q86VN1 386 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 C2CD5Q86YS7 1000 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 RASGRP4Q8TDF6 673 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 SH3RF3Q8TEJ3 882 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 SNX29Q8TEQ0 813 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 TGFBRAP1Q8WUH2 860 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 LMBR1Q8WVP7 490 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 BAP1Q92560 729 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 EMID1Q96A84 441 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 PBKQ96KB5 322 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC17Q96LX7 622 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 PAGR1Q9BTK6 254 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 LACRTQ9GZZ8 138 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 EHD4Q9H223 541 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 SEMA6BQ9H3T3 888 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 METTL14Q9HCE5 456 aaKnown RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ZCCHC17Q9NP64 241 aaKnown RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 AIPL1Q9NZN9 384 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ARHGAP20Q9P2F6 1191 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 MAPK8IP1Q9UQF2 711 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 DIS3Q9Y2L1 958 aaKnown RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ATP6V0A2Q9Y487 856 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 PCDHGC5Q9Y5F6 944 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-204ENST00000551989 ANKRD31Q8N7Z5 1873 aa5.92□□□□□ -1.46
CCNT1-204ENST00000551989 A0A087WUV0 522 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-204ENST00000551989 CYP3A7-CYP3A51PA0A087WV96 503 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 A0A0U1RQJ8 604 aa5.91□□□□□ -1.46
CCNT1-204ENST00000551989 MACROD2A1Z1Q3 448 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms