RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 MYH9P35579 1960 aaKnown RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 ESYT2A0FGR8 921 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 SMCO2A6NFE2 343 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 NOP56O00567 594 aaKnown RBP14.92□□□□□ -0.02
NPAS3-209ENST00000551008 TREHO43280 583 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 ARP10275 920 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 MTMR1Q13613 665 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
NPAS3-209ENST00000551008 RUFY3Q7L099 469 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 MXRA8Q9BRK3 442 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
NPAS3-209ENST00000551008 UPF3BQ9BZI7 483 aaKnown RBP14.92□□□□□ -0.02
NPAS3-209ENST00000551008 SLC4A7Q9Y6M7 1214 aa14.92□□□□□ -0.02
NPAS3-209ENST00000551008 PRRC2BQ5JSZ5 2229 aaKnown RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 IGLV3-22A0A075B6J6 115 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 ZBBXA8MT70 800 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 PRPF3O43395 683 aaKnown RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 ATP2A2P16615 1042 aaKnown RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 TCF7P36402 384 aaPredicted RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 ITGB3BPQ13352 177 aaPredicted RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 ADGRE1Q14246 886 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 TM6SF1Q9BZW5 370 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 ZMYND12Q9H0C1 365 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 MTIF3Q9H2K0 278 aaKnown RBP14.91□□□□□ -0.02
NPAS3-209ENST00000551008 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 SETD4Q9NVD3 440 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 EVPLQ92817 2033 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 VCANP13611 3396 aa14.91□□□□□ -0.02
NPAS3-209ENST00000551008 C17orf102A2RUQ5 167 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 FAM86B1E9PN63 330 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 MEIS1O00470 390 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 LGR5O75473 907 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 FAM86B2P0C5J1 330 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 IFNAR1P17181 557 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 PSMA5P28066 241 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 WDR5P61964 334 aaKnown RBP14.9□□□□□ -0.02
NPAS3-209ENST00000551008 CCT2P78371 535 aaKnown RBP14.9□□□□□ -0.02
NPAS3-209ENST00000551008 DEFB103AP81534 67 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 FGD1P98174 961 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 AP3B2Q13367 1082 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 RAB30Q15771 203 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 SPRED2Q7Z698 418 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 TMCO2Q7Z6W1 182 aaPredicted RBP14.9□□□□□ -0.02
NPAS3-209ENST00000551008 CCDC155Q8N6L0 562 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 MAFAQ8NHW3 353 aaPredicted RBP14.9□□□□□ -0.02
NPAS3-209ENST00000551008 RASGRP4Q8TDF6 673 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 EMSYQ7Z589 1322 aa14.9□□□□□ -0.02
NPAS3-209ENST00000551008 CCDC196A0A1B0GTZ2 297 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 FOSP01100 380 aaPredicted RBP14.89□□□□□ -0.03
NPAS3-209ENST00000551008 FOSL2P15408 326 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 ARHGAP4P98171 946 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 CEP55Q53EZ4 464 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 MARCH8Q5T0T0 291 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 RUFY4Q6ZNE9 571 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 GIMAP8Q8ND71 665 aaPredicted RBP14.89□□□□□ -0.03
NPAS3-209ENST00000551008 SLC17A8Q8NDX2 589 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 ATP6V0A1Q93050 837 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 RNF26Q9BY78 433 aaPredicted RBP14.89□□□□□ -0.03
NPAS3-209ENST00000551008 FTOQ9C0B1 505 aaKnown RBP eCLIP14.89□□□□□ -0.03
NPAS3-209ENST00000551008 AGO4Q9HCK5 861 aaKnown RBP14.89□□□□□ -0.03
NPAS3-209ENST00000551008 PCDHA11Q9Y5I1 949 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 NFASCO94856 1347 aa14.89□□□□□ -0.03
NPAS3-209ENST00000551008 ATG2AQ2TAZ0 1938 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 COL4A6Q14031 1691 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 MAFGO15525 162 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
NPAS3-209ENST00000551008 BAIAP3O94812 1187 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 CCNE2O96020 404 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 NPY5RQ15761 445 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 CNKSR3Q6P9H4 555 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 HERC6Q8IVU3 1022 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 SEPT1Q8WYJ6 367 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 ZBTB10Q96DT7 871 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 SLC9A7Q96T83 725 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 JPH1Q9HDC5 661 aaPredicted RBP14.88□□□□□ -0.03
NPAS3-209ENST00000551008 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 MSRAQ9UJ68 235 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
NPAS3-209ENST00000551008 LCHNA4D1U4 455 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 DTNBO60941 627 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 ATG7O95352 703 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 CA3P07451 260 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 CYP3A4P08684 503 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 ACTN1P12814 892 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 MARK3P27448 753 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 THPOP40225 353 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 ACTR2P61160 394 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 PLEKHG4Q58EX7 1191 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 NIPA1Q7RTP0 329 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 PHOSPHO2Q8TCD6 241 aa14.87□□□□□ -0.03
NPAS3-209ENST00000551008 LENG9Q96B70 501 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms