RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 BAG4O95429 457 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 PSEN2P49810 448 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 KRT76Q01546 638 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 NBPF20Q3BBV1 942 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 FAM20AQ96MK3 541 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 C16orf70Q9BSU1 422 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 KCNMB3Q9NPA1 279 aa18.34■□□□□ 0.53
CHMP1A-209ENST00000550872 GRIN2DO15399 1336 aa18.33■□□□□ 0.53
CHMP1A-209ENST00000550872 H3BRB1 525 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 TBX3O15119 743 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 STX6O43752 255 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 NEMFO60524 1076 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 PSMD10O75832 226 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 F2P00734 622 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 CDK7P50613 346 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 MFSD10Q14728 455 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 SNX17Q15036 470 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 CALCRLQ16602 461 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 KIAA0753Q2KHM9 967 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 TRIM60Q495X7 471 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 ZNF746Q6NUN9 644 aaPredicted RBP18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 MIS18BP1Q6P0N0 1132 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 PPP1R13LQ8WUF5 828 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 HAS1Q92839 578 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 GLG1Q92896 1179 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 AZI2Q9H6S1 392 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.52
CHMP1A-209ENST00000550872 CHMP2AO43633 222 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 PQBP1O60828 265 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 ATG7O95352 703 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 TOB1P50616 345 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 TLE2Q04725 743 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 ORC2Q13416 577 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 NBR1Q14596 966 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 RILPL1Q5EBL4 403 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 ABHD15Q6UXT9 468 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 SLFN12Q8IYM2 578 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 UNC45AQ9H3U1 944 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 SMARCAD1Q9H4L7 1026 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 MTMR6Q9Y217 621 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 CEP290O15078 2479 aa18.32■□□□□ 0.52
CHMP1A-209ENST00000550872 DCDC2CA8MYV0 355 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 WDR64B1ANS9 1081 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 HAS3O00219 553 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 BACH1O14867 736 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 LGR5O75473 907 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 PSAPP07602 524 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 SUPT20HL2P0C7V6 817 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 MIER3Q7Z3K6 550 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 SMAP1Q8IYB5 467 aaPredicted RBP18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 C7orf61Q8IZ16 206 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 PCYT2Q99447 389 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 PCDHB6Q9Y5E3 794 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 PCDHA10Q9Y5I2 948 aa18.31■□□□□ 0.52
CHMP1A-209ENST00000550872 MROH7Q68CQ1 1323 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 ALPK3Q96L96 1907 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 SFNP31947 248 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 TXKP42681 527 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 STAT5BP51692 787 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 JAK3P52333 1124 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 FAM160B1Q5W0V3 765 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 NFRKBQ6P4R8 1299 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 ANKRD33Q7Z3H0 272 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 C7orf31Q8N865 590 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 TOX2Q96NM4 488 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 TMEM60Q9H2L4 133 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 ERAP1Q9NZ08 941 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 NR2E3Q9Y5X4 410 aa18.3■□□□□ 0.52
CHMP1A-209ENST00000550872 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 TLR3O15455 904 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 MARK3P27448 753 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 PTPN11Q06124 597 aaPredicted RBP18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 RESTQ13127 1097 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 RDM1Q8NG50 284 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 MTMR9Q96QG7 549 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 HDAC6Q9UBN7 1215 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 PCDHA12Q9UN75 941 aa18.29■□□□□ 0.52
CHMP1A-209ENST00000550872 OR52Z1P0C646 297 aa18.28■□□□□ 0.52
CHMP1A-209ENST00000550872 PPP2R5CQ13362 524 aa18.28■□□□□ 0.52
CHMP1A-209ENST00000550872 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-209ENST00000550872 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
CHMP1A-209ENST00000550872 B3GNT9Q6UX72 402 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms