RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 NEMFO60524 1076 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 STAM2O75886 525 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ITGB5P18084 799 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ITGB8P26012 769 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 MARCKSP29966 332 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ALDH5A1P51649 535 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 FAAP100Q0VG06 881 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 KCNA10Q16322 511 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 HAS1Q92839 578 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 LENG1Q96BZ8 264 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 FAM161BQ96MY7 647 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 MXRA8Q9BRK3 442 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 SPTBN5Q9NRC6 3674 aaKnown RBP13.68□□□□□ -0.22
ERBB3-216ENST00000550869 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 FAM237AA0A1B0GTK4 181 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 CUTAO60888 179 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
ERBB3-216ENST00000550869 TIMP1P01033 207 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 OR52Z1P0C646 297 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
ERBB3-216ENST00000550869 GJA9P57773 515 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 UBE2HP62256 183 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 NKX3-2P78367 333 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 CCDC144BQ3MJ40 725 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
ERBB3-216ENST00000550869 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
ERBB3-216ENST00000550869 TBX21Q9UL17 535 aa13.67□□□□□ -0.22
ERBB3-216ENST00000550869 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-216ENST00000550869 ASB14A6NK59 587 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 MSH4O15457 936 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 MAFGO15525 162 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 RGS20O76081 388 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 ASGR1P07306 291 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-216ENST00000550869 PTMSP20962 102 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 CMA1P23946 247 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 CCND2P30279 289 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-216ENST00000550869 GRIN1Q05586 938 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 SEZ6LQ9BYH1 1024 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
ERBB3-216ENST00000550869 TLR3O15455 904 aaKnown RBP13.65□□□□□ -0.22
ERBB3-216ENST00000550869 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
ERBB3-216ENST00000550869 ICAM3P32942 547 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 ZNF76P36508 570 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 ME1P48163 572 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 CDK7P50613 346 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.221e-9■■□□□ 13.3
ERBB3-216ENST00000550869 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.221e-8■■■□□ 14.9
ERBB3-216ENST00000550869 STXBP2Q15833 593 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 CALCRLQ16602 461 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 PRR16Q569H4 304 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 GNASQ5JWF2 1037 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
ERBB3-216ENST00000550869 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 GPRASP2Q96D09 838 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
ERBB3-216ENST00000550869 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
ERBB3-216ENST00000550869 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-216ENST00000550869 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-216ENST00000550869 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 B4DLN1 442 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 ARVCFO00192 962 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 PSMD10O75832 226 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 CABYRO75952 493 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 ARP10275 920 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
ERBB3-216ENST00000550869 EPHB4P54760 987 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 SPIRE1Q08AE8 756 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 PDIA5Q14554 519 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 DTHD1Q6ZMT9 781 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 COL25A1Q9BXS0 654 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-216ENST00000550869 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
ERBB3-216ENST00000550869 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
ERBB3-216ENST00000550869 DHX15O43143 795 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms