RNA–Protein interactions for RNA: ENST00000550780.1

TCHP-209, Transcript of trichoplein keratin filament binding, human

TSL 4

Gene TCHP, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCHP-209	ENST00000550780	ZSWIM9	Q86XI8	627 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	PTRH1	Q86Y79	214 aa	Known RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	IRF2BP1	Q8IU81	584 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	NXPE1	Q8N323	547 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	PRPF38A	Q8NAV1	312 aa	Known RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	UHMK1	Q8TAS1	419 aa	Known RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	DDX11	Q96FC9	970 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	INTS4	Q96HW7	963 aa	Known RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	GPR101	Q96P66	508 aa	Predicted RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	TNFRSF12A	Q9NP84	129 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	THG1L	Q9NWX6	298 aa	Known RBP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	SRPK3	Q9UPE1	567 aa		4.59	□□□□□ -1.67
TCHP-209	ENST00000550780	ARAP1	Q96P48	1450 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	ZC3H12D	A2A288	527 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	FAM83G	A6ND36	823 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	NKRF	O15226	690 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	RAB11FIP3	O75154	756 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	FKBP9	O95302	570 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	LSS	P48449	732 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	MAPKAPK2	P49137	400 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	GALK1	P51570	392 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	MECP2	P51608	486 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	GUCY2F	P51841	1108 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	TMPRSS15	P98073	1019 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	DSG1	Q02413	1049 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	STAT4	Q14765	748 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	ATP13A4	Q4VNC1	1196 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	HABP4	Q5JVS0	413 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	IQSEC1	Q6DN90	963 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	FKBP9P1	Q75LS8	142 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	NECAB2	Q7Z6G3	386 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	STRA8	Q7Z7C7	330 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	SPATS2	Q86XZ4	545 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	EFHB	Q8N7U6	833 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	SMC1B	Q8NDV3	1235 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	SHISA4	Q96DD7	197 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	SP110	Q9HB58	689 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	NGRN	Q9NPE2	291 aa	Known RBP	4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	ACSS2	Q9NR19	701 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	PALD1	Q9ULE6	856 aa		4.58	□□□□□ -1.68
TCHP-209	ENST00000550780	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	ZNF891	A8MT65	544 aa	Predicted RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	MAN2B1	O00754	1011 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	SCD	O00767	359 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	SLC27A2	O14975	620 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	GPR39	O43194	453 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	TADA3	O75528	432 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	CYP17A1	P05093	508 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	BPI	P17213	487 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	JUNB	P17275	347 aa	Predicted RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	BTBD8	Q5XKL5	378 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	RPTN	Q6XPR3	784 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	ZZZ3	Q8IYH5	903 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	CHTF18	Q8WVB6	975 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	TSPAN17	Q96FV3	270 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	METTL14	Q9HCE5	456 aa	Known RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	SMURF1	Q9HCE7	757 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	KCNH7	Q9NS40	1196 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	RIC8B	Q9NVN3	520 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	SLC5A4	Q9NY91	659 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	DDX56	Q9NY93	547 aa	Known RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	FAM53C	Q9NYF3	392 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	ASH2L	Q9UBL3	628 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	FBLN5	Q9UBX5	448 aa		4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	OAS3	Q9Y6K5	1087 aa	Known RBP	4.57	□□□□□ -1.68
TCHP-209	ENST00000550780	FANCI	Q9NVI1	1328 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	HRK	O00198	91 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	NEMP1	O14524	444 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	SGSM2	O43147	1006 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	EYA4	O95677	639 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	AMY2A	P04746	511 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	ATP2A2	P16615	1042 aa	Known RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	PTPN1	P18031	435 aa	Known RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	AMY2B	P19961	511 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	LSP1	P33241	339 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	ADCYAP1R1	P41586	468 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	CDKN1C	P49918	316 aa	Predicted RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	IRAK1	P51617	712 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	KIF11	P52732	1056 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	EPHA5	P54756	1037 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	SESN3	P58005	492 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	PRR5	P85299	388 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	EXOSC10	Q01780	885 aa	Known RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	TUSC3	Q13454	348 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	FAM50A	Q14320	339 aa	Known RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	TMEM132B	Q14DG7	1078 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	DDB1	Q16531	1140 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	FYB2	Q5VWT5	728 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	TMEM132E	Q6IEE7	984 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	CBLL1	Q75N03	491 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	ZC3H18	Q86VM9	953 aa	Known RBP	4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	NME9	Q86XW9	330 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	KIAA1958	Q8N8K9	716 aa		4.56	□□□□□ -1.68
TCHP-209	ENST00000550780	ALG3	Q92685	438 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms