RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 STAP2Q9UGK3 403 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 TRIM4Q9C037 500 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 DYNLT1P63172 113 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CXorf38Q8TB03 319 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CFAP36Q96G28 342 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 XAB2Q9HCS7 855 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■□□□ 13.1
RAB3IP-212ENST00000550536 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 ENC1O14682 589 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 EPB41L5Q9HCM4 733 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 KCNQ3O43525 872 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 BMP3P12645 472 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 ADD2P35612 726 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 THAP9Q9H5L6 903 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 NHEJ1Q9H9Q4 299 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 SLC12A1Q13621 1099 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PPARGP37231 505 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 MYLK4Q86YV6 388 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 FAM149B1Q96BN6 582 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 EXOC1LA0A1B0GW35 172 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 COBLO75128 1261 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 GFPT2O94808 682 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 HSPA6P17066 643 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 IFT88Q13099 833 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RNF168Q8IYW5 571 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 E9PCH4 1651 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 MCUQ8NE86 351 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 ZC3H15Q8WU90 426 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 NRBF2Q96F24 287 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 LRRC4Q9HBW1 653 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 USP6P35125 1406 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PLCG1P19174 1290 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 GCKP35557 465 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 SLMAPQ14BN4 828 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PRPF38AQ8NAV1 312 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 TLK1Q9UKI8 766 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 BBOX1O75936 387 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 NFKBIAP25963 317 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RNF139Q8WU17 664 aa13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-212ENST00000550536 PAMP19021 973 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 IREB2P48200 963 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 C2orf54Q08AI8 447 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 PKP1Q13835 747 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 UBXN2AP68543 259 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 ART3Q13508 389 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 MYH3P11055 1940 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 CXCR5P32302 372 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 CUL1Q13616 776 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 DHX38Q92620 1227 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 GOLGA8SH3BPF8 625 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 MYH11P35749 1972 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 IFNAR2P48551 515 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 NUDCD1Q96RS6 583 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 DONSONQ9NYP3 566 aa13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-212ENST00000550536 APOEP02649 317 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 ESRRGP62508 458 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 ZNF589Q86UQ0 364 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 GDF11O95390 407 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 LIG3P49916 1009 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms