RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 ANKRD2Q9GZV1 360 aa6.09□□□□□ -1.43
KRR1-203ENST00000550023 TFIP11Q9UBB9 837 aaKnown RBP6.09□□□□□ -1.43
KRR1-203ENST00000550023 CLIP2Q9UDT6 1046 aa6.09□□□□□ -1.43
KRR1-203ENST00000550023 ADAMTS6Q9UKP5 1117 aa6.09□□□□□ -1.43
KRR1-203ENST00000550023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
KRR1-203ENST00000550023 MYH13Q9UKX3 1938 aa6.09□□□□□ -1.44
KRR1-203ENST00000550023 NAV1Q8NEY1 1877 aa6.09□□□□□ -1.44
KRR1-203ENST00000550023 TNKSO95271 1327 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 BECN2A8MW95 431 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 IFIT3O14879 490 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 CCP110O43303 1012 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 NRDCO43847 1150 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SLC3A2P08195 630 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 CD8BP10966 210 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 XBP1P17861 261 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 HOXA5P20719 270 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SCNN1AP37088 669 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 MYL5Q02045 173 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 KRTAP1-1Q07627 177 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SSRP1Q08945 709 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 WTAPQ15007 396 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SF3A1Q15459 793 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 DPCR1Q3MIW9 517 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SBK1Q52WX2 424 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 CAVIN4Q5BKX8 364 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 TMTC3Q6ZXV5 915 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 ZNF654Q8IZM8 581 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SYNE4Q8N205 404 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 FNBP4Q8N3X1 1017 aaPredicted RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 LINC00116Q8NCU8 138 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 OR13H1Q8NG92 308 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 EZH1Q92800 747 aaPredicted RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 GATA6Q92908 595 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 SYTL4Q96C24 671 aaPredicted RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 POM121Q96HA1 1249 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 TMPRSS13Q9BYE2 586 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 TRIM5Q9C035 493 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 TTC12Q9H892 705 aaPredicted RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 NARFQ9UHQ1 456 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 PYCARDQ9ULZ3 195 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 CLIC4Q9Y696 253 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 MYO5AQ9Y4I1 1855 aaKnown RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 RGPD3A6NKT7 1758 aaPredicted RBP6.08□□□□□ -1.44
KRR1-203ENST00000550023 RGPD4Q7Z3J3 1758 aa6.08□□□□□ -1.44
KRR1-203ENST00000550023 ZNF503-AS2A6NEH8 195 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 SMTNL1A8MU46 457 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 CBFA2T2O43439 604 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 ZNF202O95125 648 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 PTGS1P23219 599 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 SYKP43405 635 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 NCAPHQ15003 741 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 CCDC178Q5BJE1 867 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 CHST3Q7LGC8 479 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 FBXO33Q7Z6M2 555 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 IQCA1Q86XH1 822 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 DIS3L2Q8IYB7 885 aaKnown RBP6.07□□□□□ -1.44
KRR1-203ENST00000550023 AOPEPQ8N6M6 819 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 FLAD1Q8NFF5 587 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 SPATA20Q8TB22 786 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 FERMT2Q96AC1 680 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 BORCS6Q96GS4 357 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 PBX4Q9BYU1 374 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 PDCL3Q9H2J4 239 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 ARMT1Q9H993 441 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 BRMS1Q9HCU9 246 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 ATP8A2Q9NTI2 1148 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 FBXO2Q9UK22 296 aaPredicted RBP6.07□□□□□ -1.44
KRR1-203ENST00000550023 NAP1L2Q9ULW6 460 aaPredicted RBP6.07□□□□□ -1.44
KRR1-203ENST00000550023 R3HCC1Q9Y3T6 440 aaKnown RBP6.07□□□□□ -1.44
KRR1-203ENST00000550023 SLC4A4Q9Y6R1 1079 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 SNED1Q8TER0 1413 aa6.07□□□□□ -1.44
KRR1-203ENST00000550023 NRXN2Q9P2S2 1712 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 APPP05067 770 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CYP7A1P22680 504 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CCZ1BP86790 482 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CCZ1P86791 482 aaPredicted RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 C19orf57Q0VDD7 668 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 ORC2Q13416 577 aaPredicted RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 GNL2Q13823 731 aaKnown RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 CRY2Q49AN0 593 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 SPTY2D1Q68D10 685 aaPredicted RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 GALNT17Q6IS24 598 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 SHC4Q6S5L8 630 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 KRBA2Q6ZNG9 492 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CCDC186Q7Z3E2 898 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CATIPQ7Z7H3 387 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 CRACR2BQ8N4Y2 399 aaPredicted RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 MLKLQ8NB16 471 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 DAGLBQ8NCG7 672 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 ANKS1AQ92625 1134 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 NSUN4Q96CB9 384 aaKnown RBP6.06□□□□□ -1.44
KRR1-203ENST00000550023 SDF4Q9BRK5 362 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 PHF20Q9BVI0 1012 aa6.06□□□□□ -1.44
KRR1-203ENST00000550023 SLC26A6Q9BXS9 759 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms