RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 H3BNC9 293 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 PLEKHA8P1O95397 391 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 PTPROQ16827 1216 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 PTCRAQ6ISU1 281 aaPredicted RBP17.75■□□□□ 0.43
RAB5C-205ENST00000550013 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 TMEM192Q8IY95 271 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
RAB5C-205ENST00000550013 SENP7Q9BQF6 1050 aa17.75■□□□□ 0.43
RAB5C-205ENST00000550013 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
RAB5C-205ENST00000550013 PI4K2BG5E9Z4 385 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 H3BQ06 376 aaPredicted RBP17.74■□□□□ 0.43
RAB5C-205ENST00000550013 PIK3CDO00329 1044 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 GPR37L1O60883 481 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 ATP9AO75110 1047 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 DDAH1O94760 285 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 CHRNA1P02708 482 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 GHRP10912 638 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
RAB5C-205ENST00000550013 TIGD5Q53EQ6 642 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
RAB5C-205ENST00000550013 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
RAB5C-205ENST00000550013 APBB2Q92870 758 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 MAP4K1Q92918 833 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
RAB5C-205ENST00000550013 SEC63Q9UGP8 760 aaKnown RBP17.74■□□□□ 0.43
RAB5C-205ENST00000550013 GRXCR2A6NFK2 248 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 PRC1O43663 620 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 KCNA2P16389 499 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 MARK3P27448 753 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 KIF5BP33176 963 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 TCF7P36402 384 aaPredicted RBP17.73■□□□□ 0.43
RAB5C-205ENST00000550013 NLRX1Q86UT6 975 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 GJD3Q8N144 294 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 BANK1Q8NDB2 785 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 NEK9Q8TD19 979 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 HCN4Q9Y3Q4 1203 aa17.73■□□□□ 0.43
RAB5C-205ENST00000550013 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 hCG_1642624A0A1W2PR95 340 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 ITGB5P18084 799 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 RXRAP19793 462 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 SSTR3P32745 418 aaPredicted RBP17.72■□□□□ 0.43
RAB5C-205ENST00000550013 CTNNB1P35222 781 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 MGAT3Q09327 533 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 PPFIA1Q13136 1202 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 UBE2SQ16763 222 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 EP400NLQ6ZTU2 488 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 RAB11FIP4Q86YS3 637 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 IL17RAQ96F46 866 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 EHMT1Q9H9B1 1298 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 PKD2L1Q9P0L9 805 aa17.72■□□□□ 0.43
RAB5C-205ENST00000550013 TTC3P53804 2025 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 LOXHD1Q8IVV2 1947 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 SH2B2O14492 632 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-205ENST00000550013 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 LPIN1Q14693 890 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 GRIK4Q16099 956 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 RPAINQ86UA6 219 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 FIBCD1Q8N539 461 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-205ENST00000550013 ZBTB10Q96DT7 871 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 PABPC5Q96DU9 382 aaKnown RBP17.71■□□□□ 0.43
RAB5C-205ENST00000550013 LZTS2Q9BRK4 669 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 NSUN3Q9H649 340 aaKnown RBP17.71■□□□□ 0.43
RAB5C-205ENST00000550013 PSTPIP2Q9H939 334 aa17.71■□□□□ 0.43
RAB5C-205ENST00000550013 C5orf42Q9H799 3197 aa17.71■□□□□ 0.42
RAB5C-205ENST00000550013 MUC6Q6W4X9 2439 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 GNAQP50148 359 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 COL19A1Q14993 1142 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 MARCH8Q5T0T0 291 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 TAF2Q6P1X5 1199 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 SEPT1Q8WYJ6 367 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 RC3H2Q9HBD1 1191 aaKnown RBP17.7■□□□□ 0.42
RAB5C-205ENST00000550013 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 ADGRA3Q8IWK6 1321 aa17.7■□□□□ 0.42
RAB5C-205ENST00000550013 MBLAC1A4D2B0 266 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-205ENST00000550013 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 PUS10Q3MIT2 529 aaKnown RBP17.69■□□□□ 0.42
RAB5C-205ENST00000550013 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 GLG1Q92896 1179 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 CLDND1Q9NY35 253 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 ERAP1Q9NZ08 941 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 ARIH1Q9Y4X5 557 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-205ENST00000550013 CDY2AQ9Y6F7 541 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 KIAA1671Q9BY89 1806 aa17.69■□□□□ 0.42
RAB5C-205ENST00000550013 ENPP3O14638 875 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 GRM6O15303 877 aa17.68■□□□□ 0.42
RAB5C-205ENST00000550013 HOXD11P31277 338 aaPredicted RBP17.68■□□□□ 0.42
RAB5C-205ENST00000550013 MCM5P33992 734 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms