RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TCF7P36402 384 aaPredicted RBP15.4■□□□□ 0.06
GCN1-206ENST00000549815 CLK2P49760 499 aaKnown RBP15.4■□□□□ 0.06
GCN1-206ENST00000549815 SP4Q02446 784 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 MTMR1Q13613 665 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 IKBKEQ14164 716 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 PLEKHG4Q58EX7 1191 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 DBF4BQ8NFT6 615 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 LMBR1Q8WVP7 490 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 ZNF215Q9UL58 517 aaPredicted RBP15.4■□□□□ 0.06
GCN1-206ENST00000549815 V9GY48 417 aaPredicted RBP15.4■□□□□ 0.06
GCN1-206ENST00000549815 TTC28Q96AY4 2481 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 KAT6AQ92794 2004 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 NID2Q14112 1375 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 PRRC2BQ5JSZ5 2229 aaKnown RBP15.39■□□□□ 0.05
GCN1-206ENST00000549815 COL4A4P53420 1690 aaPredicted RBP15.39■□□□□ 0.05
GCN1-206ENST00000549815 SIP14410 1827 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 hCG_1984214I3L0E3 225 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 EFCAB14O75071 495 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 GNAT1P11488 350 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 CPA1P15085 419 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 NAPAP54920 295 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 CCDC85BQ15834 202 aaPredicted RBP15.39■□□□□ 0.05
GCN1-206ENST00000549815 FAM26DQ5JW98 314 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
GCN1-206ENST00000549815 ZNF713Q8N859 430 aaPredicted RBP15.39■□□□□ 0.05
GCN1-206ENST00000549815 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 SEPT1Q8WYJ6 367 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 MXRA8Q9BRK3 442 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 BARHL2Q9NY43 387 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 MTCH2Q9Y6C9 303 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 NRCAMQ92823 1304 aa15.39■□□□□ 0.05
GCN1-206ENST00000549815 LPXNO60711 386 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
GCN1-206ENST00000549815 TJAP1Q5JTD0 557 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 Q6ZUG5 572 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 RPAINQ86UA6 219 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
GCN1-206ENST00000549815 ARNTL2Q8WYA1 636 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 PGBD1Q96JS3 809 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 PCYT2Q99447 389 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 ANO3Q9BYT9 981 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 AGXT2Q9BYV1 514 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 PKD2L1Q9P0L9 805 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 THEGQ9P2T0 379 aa15.38■□□□□ 0.05
GCN1-206ENST00000549815 SMCO2A6NFE2 343 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 ADCY7P51828 1080 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 ARHGAP4P98171 946 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 APOBRQ0VD83 1088 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 KRT40Q6A162 431 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 JAKMIP1Q96N16 626 aaKnown RBP15.37■□□□□ 0.05
GCN1-206ENST00000549815 RAD9AQ99638 391 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 KCNH7Q9NS40 1196 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
GCN1-206ENST00000549815 MBLAC1A4D2B0 266 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 LINC01553A4QN01 128 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 MEIS1O00470 390 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 ADAMTS3O15072 1205 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 FOSP01100 380 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 CTSHP09668 335 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 ARP10275 920 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 SREBF1P36956 1147 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■■■□□ 16.3
GCN1-206ENST00000549815 HTRA4P83105 476 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 MGAT3Q09327 533 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 GRB10Q13322 594 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 ITGB3BPQ13352 177 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 AP3B2Q13367 1082 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 PKN1Q16512 942 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 PFKFB3Q16875 520 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 MARCH8Q5T0T0 291 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 RUFY4Q6ZNE9 571 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 CRYGNQ8WXF5 182 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 SYMPKQ92797 1274 aaKnown RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 BRF1Q92994 677 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 ZBED2Q9BTP6 218 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 SMARCAD1Q9H4L7 1026 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 JPH1Q9HDC5 661 aaPredicted RBP15.36■□□□□ 0.05
GCN1-206ENST00000549815 ERAP1Q9NZ08 941 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 NFASCO94856 1347 aa15.36■□□□□ 0.05
GCN1-206ENST00000549815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.35■□□□□ 0.05
GCN1-206ENST00000549815 CHRNA1P02708 482 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 AMHP03971 560 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 MARK3P27448 753 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 ERVK-21P61565 698 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 PPFIA1Q13136 1202 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 GRIK4Q16099 956 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 CEP55Q53EZ4 464 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 BLOC1S2Q6QNY1 142 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
GCN1-206ENST00000549815 SEPT8Q92599 483 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
GCN1-206ENST00000549815 GLT8D2Q9H1C3 349 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms