RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
COX6A1-202ENST00000549525 JAG2Q9Y219 1238 aa7.76□□□□□ -1.17
COX6A1-202ENST00000549525 PCDHB5Q9Y5E4 795 aa7.76□□□□□ -1.17
COX6A1-202ENST00000549525 GAKO14976 1311 aa7.76□□□□□ -1.17
COX6A1-202ENST00000549525 ZNF541Q9H0D2 1346 aa7.76□□□□□ -1.17
COX6A1-202ENST00000549525 GSC2O15499 205 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 APPP05067 770 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 SLC3A2P08195 630 aaKnown RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 GSPT1P15170 499 aaKnown RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 CHMLP26374 656 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 NTF4P34130 210 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 ADMP35318 185 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 BTDP43251 543 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 NT5C2P49902 561 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 RPS26P62854 115 aaKnown RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 TTLL4Q14679 1199 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 SCARA3Q6AZY7 606 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PAOXQ6QHF9 649 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 CWC27Q6UX04 472 aaKnown RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 GATA6Q92908 595 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 YIPF2Q9BWQ6 316 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 DHX36Q9H2U1 1008 aaKnown RBP7.75□□□□□ -1.17
COX6A1-202ENST00000549525 USP40Q9NVE5 1235 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PCDHA4Q9UN74 947 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PPP2R3BQ9Y5P8 575 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 MYH13Q9UKX3 1938 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 PITPNM2Q9BZ72 1349 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
COX6A1-202ENST00000549525 TCRBV5S4A2TA0A5A2 114 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 RBM47A0AV96 593 aaKnown RBP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 DCDC2CA8MYV0 355 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 WNT10BO00744 389 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 TFE3P19532 575 aaPredicted RBP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 MCCP23508 829 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 YY1P25490 414 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 EPS15P42566 896 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 CDK8P49336 464 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 ERVK-24P63145 666 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 RING1Q06587 406 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 SEPT6Q14141 434 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 INPP5AQ14642 412 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 SUPT20HL1Q3ZLR7 823 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 APOBEC3HQ6NTF7 200 aaKnown RBP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 TTC6Q86TZ1 520 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 FAM83AQ86UY5 434 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 TEX11Q8IYF3 940 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 SHKBP1Q8TBC3 707 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 EDC3Q96F86 508 aaKnown RBP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 MXD3Q9BW11 206 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 IDI2Q9BXS1 227 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 TAF1DQ9H5J8 278 aaPredicted RBP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 C1GALT1Q9NS00 363 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 AATFQ9NY61 560 aaKnown RBP eCLIP7.74□□□□□ -1.17
COX6A1-202ENST00000549525 TLR6Q9Y2C9 796 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 DAGLAQ9Y4D2 1042 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 CSADQ9Y600 493 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 AKAP11Q9UKA4 1901 aa7.74□□□□□ -1.17
COX6A1-202ENST00000549525 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 GPAA1O43292 621 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 ENTPD3O75355 529 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 MBD4O95243 580 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 TGFB1P01137 390 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 F13BP05160 661 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 HLA-DOAP06340 250 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 NF2P35240 595 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 NMIQ13287 307 aaPredicted RBP7.73□□□□□ -1.17
COX6A1-202ENST00000549525 MAP7Q14244 749 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 TBC1D10BQ4KMP7 808 aaPredicted RBP7.73□□□□□ -1.17
COX6A1-202ENST00000549525 LRFN4Q6PJG9 635 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 CDC37L1Q7L3B6 337 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 C12orf40Q86WS4 652 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 LDHDQ86WU2 507 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 MIGA1Q8NAN2 632 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 PHC3Q8NDX5 983 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 OSBP2Q969R2 916 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 PRMT6Q96LA8 375 aaPredicted RBP7.73□□□□□ -1.17
COX6A1-202ENST00000549525 STRBPQ96SI9 672 aaKnown RBP7.73□□□□□ -1.17
COX6A1-202ENST00000549525 DSCC1Q9BVC3 393 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 PIDD1Q9HB75 910 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 RNF112Q9ULX5 631 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 SLC4A4Q9Y6R1 1079 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 COL1A1P02452 1464 aaPredicted RBP7.73□□□□□ -1.17
COX6A1-202ENST00000549525 CCDC171Q6TFL3 1326 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 PSME4Q14997 1843 aa7.73□□□□□ -1.17
COX6A1-202ENST00000549525 SGSM2O43147 1006 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 PCP11498 1178 aaKnown RBP7.72□□□□□ -1.17
COX6A1-202ENST00000549525 TDO2P48775 406 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 ALX1Q15699 326 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 CDC42EP5Q6NZY7 148 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 UBE3DQ7Z6J8 389 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 ZAR1Q86SH2 424 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 SMYD4Q8IYR2 804 aaPredicted RBP7.72□□□□□ -1.17
COX6A1-202ENST00000549525 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 RNF214Q8ND24 703 aa7.72□□□□□ -1.17
COX6A1-202ENST00000549525 RGS22Q8NE09 1264 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms