RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PCDHA12Q9UN75 941 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 NOP56O00567 594 aaKnown RBP23.78■■□□□ 1.4
CACNB3-210ENST00000548874 YEATS4O95619 227 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 FXR2P51116 673 aaKnown RBP eCLIP23.78■■□□□ 1.4
CACNB3-210ENST00000548874 SP4Q02446 784 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 CEBPZQ03701 1054 aaKnown RBP23.78■■□□□ 1.4
CACNB3-210ENST00000548874 SLC39A14Q15043 492 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 BRDTQ58F21 947 aaPredicted RBP23.78■■□□□ 1.4
CACNB3-210ENST00000548874 GNASQ5JWF2 1037 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 SMAP1Q8IYB5 467 aaPredicted RBP23.78■■□□□ 1.4
CACNB3-210ENST00000548874 LINC00301Q8NCQ3 95 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 SEPT1Q8WYJ6 367 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 TCEAL9Q9UHQ7 104 aa23.78■■□□□ 1.4
CACNB3-210ENST00000548874 PPFIA4O75335 1185 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 IL17AQ16552 155 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 ABHD15Q6UXT9 468 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 RDM1Q8NG50 284 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 CHAMP1Q96JM3 812 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 TSEN34Q9BSV6 310 aaKnown RBP23.77■■□□□ 1.4
CACNB3-210ENST00000548874 CFAP45Q9UL16 551 aa23.77■■□□□ 1.4
CACNB3-210ENST00000548874 IGKV6D-21A0A0A0MT36 114 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 WDR64B1ANS9 1081 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 DNM1LO00429 736 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 SFNP31947 248 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 MNX1P50219 401 aaPredicted RBP23.76■■□□□ 1.39
CACNB3-210ENST00000548874 JAK3P52333 1124 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 DGKDQ16760 1214 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 TNS4Q8IZW8 715 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 PCSK9Q8NBP7 692 aaKnown RBP23.76■■□□□ 1.39
CACNB3-210ENST00000548874 DISC1Q9NRI5 854 aa23.76■■□□□ 1.39
CACNB3-210ENST00000548874 EML1O00423 815 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 CHMP2AO43633 222 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 ZEB2O60315 1214 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 KPNA6O60684 536 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 LGR5O75473 907 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 TFRCP02786 760 aaKnown RBP23.75■■□□□ 1.39
CACNB3-210ENST00000548874 SUPT20HL2P0C7V6 817 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 TCF7P36402 384 aaPredicted RBP23.75■■□□□ 1.39
CACNB3-210ENST00000548874 TECP42680 631 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 KRT85P78386 507 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 KCNA10Q16322 511 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 TMEM266Q2M3C6 531 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 DTHD1Q6ZMT9 781 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 IGSF22Q8N9C0 903 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 ANKLE1Q8NAG6 615 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 PCYT2Q99447 389 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 PCDHA10Q9Y5I2 948 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 EMSYQ7Z589 1322 aa23.75■■□□□ 1.39
CACNB3-210ENST00000548874 KIAA0100Q14667 2235 aaKnown RBP23.75■■□□□ 1.39
CACNB3-210ENST00000548874 POTEMA6NI47 508 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 PURAQ00577 322 aaKnown RBP23.74■■□□□ 1.39
CACNB3-210ENST00000548874 PDIA5Q14554 519 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 STK38Q15208 465 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 MIS18BP1Q6P0N0 1132 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 MIER3Q7Z3K6 550 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 C16orf70Q9BSU1 422 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 FBXO2Q9UK22 296 aaPredicted RBP23.74■■□□□ 1.39
CACNB3-210ENST00000548874 RCOR1Q9UKL0 485 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 PHF24Q9UPV7 400 aa23.74■■□□□ 1.39
CACNB3-210ENST00000548874 MOXD2PA6NHM9 499 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 KBTBD13C9JR72 458 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 SPTLC2O15270 562 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 PPP6R2O75170 966 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 MYCNP04198 464 aaPredicted RBP23.73■■□□□ 1.39
CACNB3-210ENST00000548874 LGALS2P05162 132 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 ASGR1P07306 291 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 PSAPP07602 524 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 MARCKSP29966 332 aaPredicted RBP23.73■■□□□ 1.39
CACNB3-210ENST00000548874 EPHA7Q15375 998 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 NCAPH2Q6IBW4 605 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 FERMT2Q96AC1 680 aa23.73■■□□□ 1.39
CACNB3-210ENST00000548874 SRPRBQ9Y5M8 271 aaKnown RBP23.73■■□□□ 1.39
CACNB3-210ENST00000548874 VWA3AA6NCI4 1184 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 F2P00734 622 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 MYL3P08590 195 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 ACLYP53396 1101 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 CCDC60Q8IWA6 550 aaPredicted RBP23.72■■□□□ 1.39
CACNB3-210ENST00000548874 KCNG4Q8TDN1 519 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 AFAP1L1Q8TED9 768 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 KAT2BQ92831 832 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 TNPO1Q92973 898 aaKnown RBP23.72■■□□□ 1.39
CACNB3-210ENST00000548874 RAB34Q9BZG1 259 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 SAMM50Q9Y512 469 aa23.72■■□□□ 1.39
CACNB3-210ENST00000548874 IGSF9BQ9UPX0 1349 aa23.71■■□□□ 1.39
CACNB3-210ENST00000548874 ZNF286BP0CG31 522 aa23.71■■□□□ 1.39
CACNB3-210ENST00000548874 GRIN1Q05586 938 aa23.71■■□□□ 1.39
CACNB3-210ENST00000548874 UTP14CQ5TAP6 766 aaKnown RBP23.71■■□□□ 1.39
CACNB3-210ENST00000548874 CXCL17Q6UXB2 119 aa23.71■■□□□ 1.39
CACNB3-210ENST00000548874 TRIM50Q86XT4 487 aa23.71■■□□□ 1.39
CACNB3-210ENST00000548874 LEO1Q8WVC0 666 aaPredicted RBP23.71■■□□□ 1.39
CACNB3-210ENST00000548874 MTG1Q9BT17 334 aaPredicted RBP23.71■■□□□ 1.39
CACNB3-210ENST00000548874 SCAND2PQ9GZW5 306 aaPredicted RBP23.71■■□□□ 1.39
CACNB3-210ENST00000548874 CABYRO75952 493 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 NCLP19338 710 aaKnown RBP23.7■■□□□ 1.38
CACNB3-210ENST00000548874 EN2P19622 333 aaPredicted RBP23.7■■□□□ 1.38
CACNB3-210ENST00000548874 SWSAP1Q6NVH7 229 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 PLPPR4Q7Z2D5 763 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 KRI1Q8N9T8 703 aaKnown RBP23.7■■□□□ 1.38
CACNB3-210ENST00000548874 HSD17B14Q9BPX1 270 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 SMARCAD1Q9H4L7 1026 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms