RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SDF4Q9BRK5 362 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 NID2Q14112 1375 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 RSPH10B2B2RC85 870 aa13□□□□□ -0.33
BEST3-209ENST00000548658 RPLP2P05387 115 aaKnown RBP13□□□□□ -0.33
BEST3-209ENST00000548658 RSPH10BP0C881 870 aa13□□□□□ -0.33
BEST3-209ENST00000548658 ZNF76P36508 570 aa13□□□□□ -0.33
BEST3-209ENST00000548658 SREBF1P36956 1147 aa13□□□□□ -0.33
BEST3-209ENST00000548658 THPOP40225 353 aa13□□□□□ -0.33
BEST3-209ENST00000548658 ZNF200P98182 395 aaPredicted RBP13□□□□□ -0.33
BEST3-209ENST00000548658 SP4Q02446 784 aa13□□□□□ -0.33
BEST3-209ENST00000548658 TRIM71Q2Q1W2 868 aaKnown RBP13□□□□□ -0.33
BEST3-209ENST00000548658 ZNF618Q5T7W0 954 aa13□□□□□ -0.33
BEST3-209ENST00000548658 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
BEST3-209ENST00000548658 NIPA1Q7RTP0 329 aa13□□□□□ -0.33
BEST3-209ENST00000548658 BICD2Q8TD16 824 aa13□□□□□ -0.33
BEST3-209ENST00000548658 GLG1Q92896 1179 aa13□□□□□ -0.33
BEST3-209ENST00000548658 RNF26Q9BY78 433 aaPredicted RBP13□□□□□ -0.33
BEST3-209ENST00000548658 ANO3Q9BYT9 981 aa13□□□□□ -0.33
BEST3-209ENST00000548658 ZMYND12Q9H0C1 365 aa13□□□□□ -0.33
BEST3-209ENST00000548658 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
BEST3-209ENST00000548658 NFASCO94856 1347 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 MEIS1O00470 390 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 NBNO60934 754 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 IFNAR1P17181 557 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 PDIA3P30101 505 aaKnown RBP12.99□□□□□ -0.33
BEST3-209ENST00000548658 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
BEST3-209ENST00000548658 RABGGTBP53611 331 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 PPP2R2DQ66LE6 453 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 NKX2-4Q9H2Z4 354 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 SETD4Q9NVD3 440 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 SLC9A2Q9UBY0 812 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
BEST3-209ENST00000548658 TANC1Q9C0D5 1861 aa12.99□□□□□ -0.33
BEST3-209ENST00000548658 SCN5AQ14524 2016 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 GSTTP1A0A1W2PQM5 241 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 TREHO43280 583 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 LGR5O75473 907 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 CENPBP07199 599 aaPredicted RBP12.98□□□□□ -0.33
BEST3-209ENST00000548658 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 HIC1Q14526 733 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 GPNMBQ14956 572 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 CPLX2Q6PUV4 134 aaKnown RBP12.98□□□□□ -0.33
BEST3-209ENST00000548658 RPAINQ86UA6 219 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 TRIM50Q86XT4 487 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.98□□□□□ -0.33
BEST3-209ENST00000548658 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
BEST3-209ENST00000548658 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 ZNF274Q96GC6 653 aaPredicted RBP12.98□□□□□ -0.33
BEST3-209ENST00000548658 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
BEST3-209ENST00000548658 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 CPLX1O14810 134 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 TLL1O43897 1013 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 CYP3A4P08684 503 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 SLC26A2P50443 739 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
BEST3-209ENST00000548658 ADAM17P78536 824 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 NTRK3Q16288 839 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 PKN1Q16512 942 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
BEST3-209ENST00000548658 CYP2W1Q8TAV3 490 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 LMBR1Q8WVP7 490 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 SEPT8Q92599 483 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 WNT8BQ93098 351 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 AGO4Q9HCK5 861 aaKnown RBP12.97□□□□□ -0.33
BEST3-209ENST00000548658 MYO9BQ13459 2157 aa12.97□□□□□ -0.33
BEST3-209ENST00000548658 CA3P07451 260 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 ARP10275 920 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
BEST3-209ENST00000548658 STAT5BP51692 787 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 ACTR2P61160 394 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
BEST3-209ENST00000548658 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
BEST3-209ENST00000548658 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
BEST3-209ENST00000548658 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 TET1Q8NFU7 2136 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 APBB2Q92870 758 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 PHKBQ93100 1093 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 PGBD1Q96JS3 809 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms