RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SCN7AQ01118 1682 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 DNM1LO00429 736 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 GNA14O95837 355 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 PSEN1P49768 467 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 QPCTQ16769 361 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 ZCWPW2Q504Y3 356 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 TAX1BP1Q86VP1 789 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 UBLCP1Q8WVY7 318 aaPredicted RBP25.33■■□□□ 1.65
NPAS3-206ENST00000548645 CEP63Q96MT8 703 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 MTMR9Q96QG7 549 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 CCDC87Q9NVE4 849 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 STX8Q9UNK0 236 aa25.33■■□□□ 1.65
NPAS3-206ENST00000548645 BHMG1C9JSJ3 638 aaPredicted RBP25.33■■□□□ 1.64
NPAS3-206ENST00000548645 SART1O43290 800 aaKnown RBP25.33■■□□□ 1.64
NPAS3-206ENST00000548645 GOLGA8HP0CJ92 632 aa25.33■■□□□ 1.64
NPAS3-206ENST00000548645 LACTB2Q53H82 288 aaPredicted RBP25.33■■□□□ 1.64
NPAS3-206ENST00000548645 FAM133AQ8N9E0 248 aa25.33■■□□□ 1.64
NPAS3-206ENST00000548645 DYNLL2Q96FJ2 89 aa25.33■■□□□ 1.64
NPAS3-206ENST00000548645 TMEM47Q9BQJ4 181 aa25.33■■□□□ 1.64
NPAS3-206ENST00000548645 FBXL5Q9UKA1 691 aa25.33■■□□□ 1.64
NPAS3-206ENST00000548645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.33■■□□□ 1.64
NPAS3-206ENST00000548645 PGRMC1O00264 195 aaKnown RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 PRDX5P30044 214 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 GKAP1Q5VSY0 366 aaPredicted RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 INTS5Q6P9B9 1019 aaKnown RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 DDX42Q86XP3 938 aaKnown RBP eCLIP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 ZNF444Q8N0Y2 327 aaPredicted RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 GLIS3Q8NEA6 775 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 RAPGEF5Q92565 580 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 NOVA2Q9UNW9 492 aaKnown RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 CCDC188H7C350 402 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 IFFO1Q0D2I5 559 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 ENOX2Q16206 610 aaKnown RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 REXO1Q8N1G1 1221 aaKnown RBP25.32■■□□□ 1.64
NPAS3-206ENST00000548645 COL4A1P02462 1669 aa25.32■■□□□ 1.64
NPAS3-206ENST00000548645 PHLPP1O60346 1717 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 KRT79Q5XKE5 535 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 LAMB2P55268 1798 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 PDIA5Q14554 519 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 CEP57Q86XR8 500 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 SNX29Q8TEQ0 813 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 TATDN2Q93075 761 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 VEZTQ9HBM0 779 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 HAUS2Q9NVX0 235 aa25.31■■□□□ 1.64
NPAS3-206ENST00000548645 SEC63Q9UGP8 760 aaKnown RBP25.31■■□□□ 1.64
NPAS3-206ENST00000548645 SCTRP47872 440 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 SEPT2Q15019 361 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 TRIM59Q8IWR1 403 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.3■■□□□ 1.64
NPAS3-206ENST00000548645 NEUROG2Q9H2A3 272 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 BIN2Q9UBW5 565 aaPredicted RBP25.3■■□□□ 1.64
NPAS3-206ENST00000548645 CNOT8Q9UFF9 292 aaKnown RBP25.3■■□□□ 1.64
NPAS3-206ENST00000548645 SWAP70Q9UH65 585 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 CPLX4Q7Z7G2 160 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 N4BP2L2Q92802 583 aaPredicted RBP25.3■■□□□ 1.64
NPAS3-206ENST00000548645 EZRP15311 586 aaKnown RBP25.3■■□□□ 1.64
NPAS3-206ENST00000548645 AP1M1Q9BXS5 423 aa25.3■■□□□ 1.64
NPAS3-206ENST00000548645 EPS15P42566 896 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 MARSP56192 900 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 COASYQ13057 564 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 XRCC4Q13426 336 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 SPRED3Q2MJR0 410 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 CPVLQ9H3G5 476 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 PDHBP11177 359 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 MAGOHP61326 146 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 PPARDQ03181 441 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 FAM26FQ5R3K3 315 aa25.29■■□□□ 1.64
NPAS3-206ENST00000548645 PAXIP1Q6ZW49 1069 aaPredicted RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 MAGOHBQ96A72 148 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 DDX47Q9H0S4 455 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 CNOT10Q9H9A5 744 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 NOC2LQ9Y3T9 749 aaKnown RBP25.29■■□□□ 1.64
NPAS3-206ENST00000548645 KRIT1O00522 736 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 SSBP05455 408 aaKnown RBP eCLIP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 GHRP10912 638 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 HIBADHP31937 336 aaKnown RBP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 SLC8A1P32418 973 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 CCDC26Q8TAB7 109 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 KDM4CQ9H3R0 1056 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 SLITRK6Q9H5Y7 841 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 TPX2Q9ULW0 747 aaKnown RBP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 CRKLP46109 303 aaKnown RBP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 BYSLQ13895 437 aaKnown RBP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 KRT71Q3SY84 523 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 TMEM119Q4V9L6 283 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 LRRC57Q8N9N7 239 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 SCLT1Q96NL6 688 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 GANQ9H2C0 597 aa25.28■■□□□ 1.64
NPAS3-206ENST00000548645 BZW2Q9Y6E2 419 aaKnown RBP25.28■■□□□ 1.64
NPAS3-206ENST00000548645 ROBO3Q96MS0 1386 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 A0A0G2JS52 829 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 POTEMA6NI47 508 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
NPAS3-206ENST00000548645 TMC3Q7Z5M5 1100 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 DZIP1Q86YF9 867 aaKnown RBP25.27■■□□□ 1.64
NPAS3-206ENST00000548645 DAPK3O43293 454 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 CCDC88AQ3V6T2 1871 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 KCNK18Q7Z418 384 aa25.27■■□□□ 1.64
NPAS3-206ENST00000548645 FAM228AQ86W67 206 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms