RNA–Protein interactions for RNA: ENST00000548221.5

NCKAP1L-204, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 3,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-204ENST00000548221 TGFBRAP1Q8WUH2 860 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 LBHD1Q9BQE6 289 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 DDX23Q9BUQ8 820 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 TLR10Q9BXR5 811 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 NDST4Q9H3R1 872 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 LUC7LQ9NQ29 371 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 PLCB1Q9NQ66 1216 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 LMCD1Q9NZU5 365 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 SRRM3A6NNA2 597 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 SH2B2O14492 632 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 PALMO75781 387 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 ECEL1O95672 775 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 CYP2D6P10635 497 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 GNAT2P19087 354 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 EEF1GP26641 437 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 TPP2P29144 1249 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 HSPA9P38646 679 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 ABL2P42684 1182 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 MSH2P43246 934 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 SLCO1A2P46721 670 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 SEPT2Q15019 361 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 DIXDC1Q155Q3 683 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 ZNF658Q5TYW1 1059 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 CNBD1Q8NA66 436 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 SPATA20Q8TB22 786 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 CERKQ8TCT0 537 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 L3MBTL3Q96JM7 780 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 FGD4Q96M96 766 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 PRMT1Q99873 361 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 DDX47Q9H0S4 455 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 CNOT10Q9H9A5 744 aaKnown RBP6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 NLRC4Q9NPP4 1024 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
NCKAP1L-204ENST00000548221 A0A1W2PQC6 194 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 SMIM22K7EJ46 135 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 ZNF263O14978 683 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RGS16O15492 202 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 DAPK3O43293 454 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 GTPBP6O43824 516 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 UFL1O94874 794 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 BAG3O95817 575 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RFC5P40937 340 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 MRPS35P82673 323 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 PRPF4BQ13523 1007 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RIPK1Q13546 671 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 BYSLQ13895 437 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 TMEM132AQ24JP5 1023 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RASIP1Q5U651 963 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RNF220Q5VTB9 566 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 LRIG3Q6UXM1 1119 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 GPKOWQ92917 476 aaPredicted RBP eCLIP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RPS6KC1Q96S38 1066 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 FOXP1Q9H334 677 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 CPVLQ9H3G5 476 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 TSKSQ9UJT2 592 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 USH1CQ9Y6N9 552 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 EP400Q96L91 3159 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 ARHGAP23Q9P227 1491 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 CETN3O15182 167 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 PPFIA2O75334 1257 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RNF8O76064 485 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 DEXIO95424 95 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 SHBGP04278 402 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 KRT18P05783 430 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 GSTA1P08263 222 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 KRT16P08779 473 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 PRDX5P30044 214 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 KRT2P35908 639 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 SLC1A4P43007 532 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 GCLCP48506 637 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 KLC1Q07866 573 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 PTGDRQ13258 359 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 LRRC14Q15048 493 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 HOOK3Q86VS8 718 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 KSR1Q8IVT5 923 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 MREGQ8N565 214 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 MTMR8Q96EF0 704 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 DYNLL2Q96FJ2 89 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 CNOT6LQ96LI5 555 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 GBP5Q96PP8 586 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 MLXIPLQ9NP71 852 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 SEC63Q9UGP8 760 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 PEAK1Q9H792 1746 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 RFX7Q2KHR2 1363 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 XDHP47989 1333 aa6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 XRN1Q8IZH2 1706 aaKnown RBP6.35□□□□□ -1.39
NCKAP1L-204ENST00000548221 FAM170AA1A519 330 aa6.34□□□□□ -1.39
NCKAP1L-204ENST00000548221 PFDN1O60925 122 aa6.34□□□□□ -1.39
NCKAP1L-204ENST00000548221 SUN1O94901 812 aa6.34□□□□□ -1.39
NCKAP1L-204ENST00000548221 USP17L8P0C7I0 530 aa6.34□□□□□ -1.39
NCKAP1L-204ENST00000548221 PRLRP16471 622 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms