RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 GPNMBQ14956 572 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 TRIM71Q2Q1W2 868 aaKnown RBP9.03□□□□□ -0.96
PRIM1-203ENST00000548173 UTP14CQ5TAP6 766 aaKnown RBP9.03□□□□□ -0.96
PRIM1-203ENST00000548173 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
PRIM1-203ENST00000548173 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
PRIM1-203ENST00000548173 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 AFAP1L1Q8TED9 768 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 WNT8BQ93098 351 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 RNPEPQ9H4A4 650 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 MTMR10Q9NXD2 777 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 PKD2L1Q9P0L9 805 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
PRIM1-203ENST00000548173 VPS54Q9P1Q0 977 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 TPCN1Q9ULQ1 816 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 SZT2Q5T011 3432 aa9.03□□□□□ -0.96
PRIM1-203ENST00000548173 SCN5AQ14524 2016 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 IGLV3-22A0A075B6J6 115 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 C17orf102A2RUQ5 167 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 FAM86B1E9PN63 330 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 PFKFB2O60825 505 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 FAM86B2P0C5J1 330 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 CKBP12277 381 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SELPP16109 830 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 ZNF76P36508 570 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 ADAM17P78536 824 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 OTOP2Q7RTS6 562 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 DEFB128Q7Z7B8 93 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SERINC5Q86VE9 423 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 PLA2G4DQ86XP0 818 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 CCDC155Q8N6L0 562 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 BICD2Q8TD16 824 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 PCYT2Q99447 389 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SLKQ9H2G2 1235 aaPredicted RBP9.02□□□□□ -0.97
PRIM1-203ENST00000548173 MTIF3Q9H2K0 278 aaKnown RBP9.02□□□□□ -0.97
PRIM1-203ENST00000548173 AGO4Q9HCK5 861 aaKnown RBP9.02□□□□□ -0.97
PRIM1-203ENST00000548173 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SETD4Q9NVD3 440 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 SLC9A2Q9UBY0 812 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 ZNF215Q9UL58 517 aaPredicted RBP9.02□□□□□ -0.97
PRIM1-203ENST00000548173 TET1Q8NFU7 2136 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 NFASCO94856 1347 aa9.02□□□□□ -0.97
PRIM1-203ENST00000548173 GRXCR1A8MXD5 290 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 TREHO43280 583 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 EDIL3O43854 480 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 LGR5O75473 907 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 ATG7O95352 703 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 PARNO95453 639 aaKnown RBP9.01□□□□□ -0.97
PRIM1-203ENST00000548173 DNAJB2P25686 324 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 CIITAP33076 1130 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 NLRP5P59047 1200 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 ITGB3BPQ13352 177 aaPredicted RBP9.01□□□□□ -0.97
PRIM1-203ENST00000548173 NPY5RQ15761 445 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 C8orf34Q49A92 452 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 ZNF697Q5TEC3 545 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 LRRC8DQ7L1W4 858 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 FAM177A1Q8N128 213 aaPredicted RBP9.01□□□□□ -0.97
PRIM1-203ENST00000548173 ATP6V0A1Q93050 837 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 AIFM3Q96NN9 605 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 SDF4Q9BRK5 362 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 TANC1Q9C0D5 1861 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
PRIM1-203ENST00000548173 TTYH1Q9H313 450 aaPredicted RBP9.01□□□□□ -0.97
PRIM1-203ENST00000548173 SEMA6BQ9H3T3 888 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 SMARCAD1Q9H4L7 1026 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 PCDHA4Q9UN74 947 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 EMSYQ7Z589 1322 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 NRCAMQ92823 1304 aa9.01□□□□□ -0.97
PRIM1-203ENST00000548173 TMEM265A0A087WTH1 108 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 M0R2N6 131 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
PRIM1-203ENST00000548173 DHX15O43143 795 aaKnown RBP9□□□□□ -0.97
PRIM1-203ENST00000548173 NBNO60934 754 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 CDKL5O76039 1030 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 CTDNEP1O95476 244 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 CCNE2O96020 404 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 CXCL10P02778 98 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 GNAT1P11488 350 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 ACTN1P12814 892 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 PBX2P40425 430 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 NEK4P51957 841 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 ACTR2P61160 394 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 MBTPS1Q14703 1052 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 ME3Q16798 604 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 ZNF618Q5T7W0 954 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 GALNT17Q6IS24 598 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 BLIDQ8IZY5 108 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 DAGLBQ8NCG7 672 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 LMBR1Q8WVP7 490 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 GLG1Q92896 1179 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 LENG9Q96B70 501 aa9□□□□□ -0.97
PRIM1-203ENST00000548173 FAM161BQ96MY7 647 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms