RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 COL4A4P53420 1690 aaPredicted RBP24.56■■□□□ 1.52
USP44-204ENST00000547951 KAT6AQ92794 2004 aa24.56■■□□□ 1.52
USP44-204ENST00000547951 TLL1O43897 1013 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 LGR5O75473 907 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 PARNO95453 639 aaKnown RBP24.55■■□□□ 1.52
USP44-204ENST00000547951 ADD1P35611 737 aaKnown RBP24.55■■□□□ 1.52
USP44-204ENST00000547951 ADAM17P78536 824 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 FAM117BQ6P1L5 589 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.55■■□□□ 1.52
USP44-204ENST00000547951 MICALL1Q8N3F8 863 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 ARNTL2Q8WYA1 636 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 JAKMIP1Q96N16 626 aaKnown RBP24.55■■□□□ 1.52
USP44-204ENST00000547951 RIC8AQ9NPQ8 531 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 JADE2Q9NQC1 790 aa24.55■■□□□ 1.52
USP44-204ENST00000547951 HSPA4P34932 840 aa24.54■■□□□ 1.52
USP44-204ENST00000547951 ARHGAP4P98171 946 aa24.54■■□□□ 1.52
USP44-204ENST00000547951 MKRN4PQ13434 485 aaPredicted RBP24.54■■□□□ 1.52
USP44-204ENST00000547951 Q6ZUG5 572 aa24.54■■□□□ 1.52
USP44-204ENST00000547951 DBF4BQ8NFT6 615 aa24.54■■□□□ 1.52
USP44-204ENST00000547951 ZNF215Q9UL58 517 aaPredicted RBP24.54■■□□□ 1.52
USP44-204ENST00000547951 SIP14410 1827 aa24.54■■□□□ 1.52
USP44-204ENST00000547951 ABHD14A-ACY1A0A1B0GW23 586 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 MARK3P27448 753 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 ADCY7P51828 1080 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 IKBKEQ14164 716 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 RUFY4Q6ZNE9 571 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 GIMAP8Q8ND71 665 aaPredicted RBP24.53■■□□□ 1.52
USP44-204ENST00000547951 BRF1Q92994 677 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 BARHL2Q9NY43 387 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 XIRP2A4UGR9 3374 aa24.53■■□□□ 1.52
USP44-204ENST00000547951 KIF28PB7ZC32 967 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 ARP10275 920 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 PLEKHG4Q58EX7 1191 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 PPP1R18Q6NYC8 613 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 ZBTB10Q96DT7 871 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 CDHR1Q96JP9 859 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 PCYT2Q99447 389 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 MXRA8Q9BRK3 442 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 ZBED2Q9BTP6 218 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 ANO3Q9BYT9 981 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 KCNH7Q9NS40 1196 aa24.52■■□□□ 1.52
USP44-204ENST00000547951 SMCO2A6NFE2 343 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 PPFIA3O75145 1194 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 GJB5O95377 273 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 HMGB1P09429 215 aaKnown RBP24.51■■□□□ 1.51
USP44-204ENST00000547951 FGD1P98174 961 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 SEPT1Q8WYJ6 367 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 MTCH2Q9Y6C9 303 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 EMSYQ7Z589 1322 aa24.51■■□□□ 1.51
USP44-204ENST00000547951 CLK2P49760 499 aaKnown RBP24.5■■□□□ 1.51
USP44-204ENST00000547951 METAP2P50579 478 aaKnown RBP eCLIP24.5■■□□□ 1.51
USP44-204ENST00000547951 MUC3AQ02505 3323 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 LPXNO60711 386 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 GNAT1P11488 350 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 RPS6KB1P23443 525 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 RCAN1P53805 252 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 PPFIA1Q13136 1202 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 ITGB3BPQ13352 177 aaPredicted RBP24.49■■□□□ 1.51
USP44-204ENST00000547951 BLOC1S2Q6QNY1 142 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 EHMT1Q9H9B1 1298 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 JPH1Q9HDC5 661 aaPredicted RBP24.49■■□□□ 1.51
USP44-204ENST00000547951 MTUS1Q9ULD2 1270 aa24.49■■□□□ 1.51
USP44-204ENST00000547951 CHRNA1P02708 482 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 GRB10Q13322 594 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 GRIK4Q16099 956 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 PKN1Q16512 942 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 PFKFB3Q16875 520 aaPredicted RBP24.48■■□□□ 1.51
USP44-204ENST00000547951 MARCH8Q5T0T0 291 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 JAKMIP3Q5VZ66 844 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 MYOCDQ8IZQ8 938 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 NRCAMQ92823 1304 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 GLG1Q92896 1179 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 UIMC1Q96RL1 719 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 RAD9AQ99638 391 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 ERAP1Q9NZ08 941 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 THEGQ9P2T0 379 aa24.48■■□□□ 1.51
USP44-204ENST00000547951 LINC01553A4QN01 128 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 EFCAB14O75071 495 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 SCG2P13521 617 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 SREBF1P36956 1147 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 CEP55Q53EZ4 464 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 TJAP1Q5JTD0 557 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 GDPD5Q8WTR4 605 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 PHKBQ93100 1093 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 AGO4Q9HCK5 861 aaKnown RBP24.47■■□□□ 1.51
USP44-204ENST00000547951 SLC9A2Q9UBY0 812 aa24.47■■□□□ 1.51
USP44-204ENST00000547951 NID2Q14112 1375 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 hCG_1984214I3L0E3 225 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 MAFGO15525 162 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 CAND2O75155 1236 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 FOSP01100 380 aaPredicted RBP24.46■■□□□ 1.51
USP44-204ENST00000547951 POU3F3P20264 500 aaPredicted RBP24.46■■□□□ 1.51
USP44-204ENST00000547951 ACTR2P61160 394 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 IGBP1P78318 339 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 FAM26DQ5JW98 314 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 ZNF713Q8N859 430 aaPredicted RBP24.46■■□□□ 1.51
USP44-204ENST00000547951 AGXT2Q9BYV1 514 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 SMARCAD1Q9H4L7 1026 aa24.46■■□□□ 1.51
USP44-204ENST00000547951 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.45■■□□□ 1.5
USP44-204ENST00000547951 FAM86B1E9PN63 330 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms