RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LRRC8DQ7L1W4 858 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 CYFIP1Q7L576 1253 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 CAGE1Q8TC20 777 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
SCAF11-211ENST00000547950 TCEANC2Q96MN5 208 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 CTAGE1Q96RT6 745 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 COL25A1Q9BXS0 654 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-211ENST00000547950 CERS4Q9HA82 394 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 PCDHA11Q9Y5I1 949 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 LTBP2Q14767 1821 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 H3BRB1 525 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 RFXAPO00287 272 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 FIBPO43427 364 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 STAM2O75886 525 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 CA3P07451 260 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 THPOP40225 353 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 PTK7Q13308 1070 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 ADGRE1Q14246 886 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 NEDD9Q14511 834 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 HIC1Q14526 733 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 GPNMBQ14956 572 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 UBE2SQ16763 222 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 UTP14CQ5TAP6 766 aaKnown RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 PCNX4Q63HM2 1172 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 TMTC3Q6ZXV5 915 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 HEATR3Q7Z4Q2 680 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 TMCO2Q7Z6W1 182 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 NLRX1Q86UT6 975 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 MICU3Q86XE3 530 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 USP38Q8NB14 1042 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 PHOSPHO2Q8TCD6 241 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 AFAP1L1Q8TED9 768 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 ATP6V0A1Q93050 837 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 INPP4AQ96PE3 977 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 NEK1Q96PY6 1258 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 C16orf70Q9BSU1 422 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 TUT1Q9H6E5 874 aaKnown RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 NAP1L2Q9ULW6 460 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 TELO2Q9Y4R8 837 aa7.71□□□□□ -1.18
SCAF11-211ENST00000547950 V9GY48 417 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-211ENST00000547950 MCM3APO60318 1980 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 C17orf102A2RUQ5 167 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 KIF28PB7ZC32 967 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 PIK3CDO00329 1044 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ZBTB43O43298 467 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 NBNO60934 754 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ATP9AO75110 1047 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 CDC45O75419 566 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 LGALS2P05162 132 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ICAM3P32942 547 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 KCNJ6P48051 423 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 FGD1P98174 961 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ADCK5Q3MIX3 580 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ZNF618Q5T7W0 954 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 XRRA1Q6P2D8 792 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 METTL7BQ6UX53 244 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 DHX32Q7L7V1 743 aaKnown RBP7.7□□□□□ -1.18
SCAF11-211ENST00000547950 PACS2Q86VP3 889 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 HERC6Q8IVU3 1022 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 ARNTL2Q8WYA1 636 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 WNT8BQ93098 351 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 CCDC136Q96JN2 1154 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 SLC9A7Q96T83 725 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 GPR20Q99678 358 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 USP26Q9BXU7 913 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 RNPEPQ9H4A4 650 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 SETD4Q9NVD3 440 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 PKD2L1Q9P0L9 805 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 BRPF3Q9ULD4 1205 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 PCDHA6Q9UN73 950 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 PCDHA8Q9Y5H6 950 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 LAMA2P24043 3122 aaKnown RBP7.7□□□□□ -1.18
SCAF11-211ENST00000547950 COL6A3P12111 3177 aa7.7□□□□□ -1.18
SCAF11-211ENST00000547950 A0A0C4DFX4 3053 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 KLF18A0A0U1RQI7 1052 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 SPDYE3A6NKU9 549 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 RSPH10B2B2RC85 870 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 TREHO43280 583 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 TLL1O43897 1013 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 BAIAP3O94812 1187 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 PARNO95453 639 aaKnown RBP7.69□□□□□ -1.18
SCAF11-211ENST00000547950 RSPH10BP0C881 870 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 CPA1P15085 419 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 ITGB5P18084 799 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 NAPAP54920 295 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 WDR5P61964 334 aaKnown RBP7.69□□□□□ -1.18
SCAF11-211ENST00000547950 EXOSC10Q01780 885 aaKnown RBP7.69□□□□□ -1.18
SCAF11-211ENST00000547950 IKBKEQ14164 716 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 KRT32Q14532 448 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 RTN1Q16799 776 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 TCTN1Q2MV58 587 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 TRIM71Q2Q1W2 868 aaKnown RBP7.69□□□□□ -1.18
SCAF11-211ENST00000547950 FAM117BQ6P1L5 589 aa7.69□□□□□ -1.18
SCAF11-211ENST00000547950 CNKSR3Q6P9H4 555 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms