RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 NKX2-4Q9H2Z4 354 aa5.94□□□□□ -1.46
CBX5-203ENST00000547872 SP110Q9HB58 689 aa5.94□□□□□ -1.46
CBX5-203ENST00000547872 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
CBX5-203ENST00000547872 RNF114Q9Y508 228 aa5.94□□□□□ -1.46
CBX5-203ENST00000547872 LY75O60449 1722 aa5.94□□□□□ -1.46
CBX5-203ENST00000547872 BCL9O00512 1426 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 TRBV23OR9-2A0A075B6M9 112 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 PDPK1O15530 556 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 PAMP19021 973 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 LAPTM5Q13571 262 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 SLCO6A1Q86UG4 719 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 SIRT2Q8IXJ6 389 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 NUP43Q8NFH3 380 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 LIN37Q96GY3 246 aaPredicted RBP5.93□□□□□ -1.46
CBX5-203ENST00000547872 JMJD8Q96S16 334 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 MPHOSPH9Q99550 1183 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 SLC6A17Q9H1V8 727 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 CYP26B1Q9NR63 512 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 MSRB2Q9Y3D2 182 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 CCDC7Q96M83 1385 aa5.93□□□□□ -1.46
CBX5-203ENST00000547872 USP54Q70EL1 1684 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 NPHP3-ACAD11A0A0J9YXS1 232 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 TBX1O43435 398 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 SNRPB2P08579 225 aaKnown RBP5.92□□□□□ -1.46
CBX5-203ENST00000547872 IL2RBP14784 551 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 PRKCAP17252 672 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 HOXC12P31275 282 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 KCNJ6P48051 423 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 GALK1P51570 392 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 IFRD2Q12894 506 aaPredicted RBP5.92□□□□□ -1.46
CBX5-203ENST00000547872 RASGRF1Q13972 1273 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 JMYQ8N9B5 988 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 TMEM52Q8NDY8 209 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 UBXN4Q92575 508 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 SGSM3Q96HU1 749 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 CCDC113Q9H0I3 377 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 IMPACTQ9P2X3 320 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 YBX2Q9Y2T7 364 aaKnown RBP5.92□□□□□ -1.46
CBX5-203ENST00000547872 CD2APQ9Y5K6 639 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
CBX5-203ENST00000547872 USP47Q96K76 1375 aa5.92□□□□□ -1.46
CBX5-203ENST00000547872 CICQ96RK0 1608 aaPredicted RBP5.92□□□□□ -1.46
CBX5-203ENST00000547872 TOGARAM1Q9Y4F4 1720 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 A0A1W2PQJ5 194 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 A0A1W2PQU0 124 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 ZNF503-AS2A6NEH8 195 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 LRRC10BA6NIK2 292 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 NOTOA8MTQ0 251 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 L1CAMP32004 1257 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 PDE6BP35913 854 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 ARL4AP40617 200 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 ECI1P42126 302 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 SERINC3Q13530 473 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 HSP90AA2PQ14568 343 aaPredicted RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 MLANAQ16655 118 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 LRRC47Q8N1G4 583 aaKnown RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 COPS5Q92905 334 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 ZNF669Q96BR6 464 aaPredicted RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 INTS4Q96HW7 963 aaKnown RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 CCDC140Q96MF4 163 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 DEPDC7Q96QD5 511 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 SRPK1Q96SB4 655 aaKnown RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 PLCD4Q9BRC7 762 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 CRTAC1Q9NQ79 661 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 GPRC5CQ9NQ84 441 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 CLEC1BQ9P126 229 aa5.91□□□□□ -1.46
CBX5-203ENST00000547872 TNRC6CQ9HCJ0 1690 aaKnown RBP5.91□□□□□ -1.46
CBX5-203ENST00000547872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
CBX5-203ENST00000547872 CPP00450 1065 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 THBDP07204 575 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 PLS3P13797 630 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 PNLIPP16233 465 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 RBM10P98175 930 aaKnown RBP5.9□□□□□ -1.46
CBX5-203ENST00000547872 CYP4F8P98187 520 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 ADGRF1Q5T601 910 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 CPNE8Q86YQ8 564 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.9□□□□□ -1.46
CBX5-203ENST00000547872 SHISA4Q96DD7 197 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 AARSD1Q9BTE6 412 aaKnown RBP5.9□□□□□ -1.46
CBX5-203ENST00000547872 NSUN3Q9H649 340 aaKnown RBP5.9□□□□□ -1.46
CBX5-203ENST00000547872 RNF181Q9P0P0 153 aa5.9□□□□□ -1.46
CBX5-203ENST00000547872 C4BP0C0L5 1744 aa5.9□□□□□ -1.47
CBX5-203ENST00000547872 NFAT5O94916 1531 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 RGPD2P0DJD1 1756 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 A0A0G2JLW4 131 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 EFEMP2O95967 443 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 CORO7P57737 925 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 SSRP1Q08945 709 aaKnown RBP5.89□□□□□ -1.47
CBX5-203ENST00000547872 RASA3Q14644 834 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 PRR23BQ6ZRT6 265 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 LRP10Q7Z4F1 713 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 ARHGEF25Q86VW2 580 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 AMIGO3Q86WK7 504 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 IRF2BP1Q8IU81 584 aa5.89□□□□□ -1.47
CBX5-203ENST00000547872 MKL1Q969V6 931 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms