RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 ASIC2Q16515 512 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 KLHDC7AQ5VTJ3 777 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 C8orf74Q6P047 294 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 TLR10Q9BXR5 811 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 LRRC4BQ9NT99 713 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 PCDHA1Q9Y5I3 950 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 COL2A1P02458 1487 aaPredicted RBP16.08■□□□□ 0.16
LETMD1-209ENST00000547318 GFPT2O94808 682 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 RASSF7Q02833 373 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 ADAM9Q13443 819 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 LRRC41Q15345 812 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 FAM76AQ8TAV0 307 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 SH3GL2Q99962 352 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 FAM107BQ9H098 131 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 DNM3Q9UQ16 869 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 CIITAP33076 1130 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 SLC1A4P43007 532 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 EIF6P56537 245 aaKnown RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 NFIL3Q16649 462 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 TTBK2Q6IQ55 1244 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 PODNQ7Z5L7 613 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 GMCL1Q96IK5 515 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 LRRC1Q9BTT6 524 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 GANQ9H2C0 597 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-209ENST00000547318 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 INTUQ9ULD6 942 aa16.07■□□□□ 0.16
LETMD1-209ENST00000547318 ANKRD31Q8N7Z5 1873 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GAP43P17677 238 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 MUTP22033 750 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SREBF1P36956 1147 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 DDR1Q08345 913 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 PAK2Q13177 524 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SLC51AQ86UW1 340 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 MREGQ8N565 214 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 RUFY1Q96T51 708 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 ARMCX3Q9UH62 379 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GOLGA6CA6NDK9 693 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 POTECB2RU33 542 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 E9PMD0 336 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 TLR2O60603 784 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 HSF2BPO75031 334 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 UBE4BO95155 1302 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 AFPP02771 609 aaKnown RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GOLGA6DP0CG33 693 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GGCXP38435 758 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 PRKCIP41743 596 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 VPS36Q86VN1 386 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 POLR3CQ9BUI4 534 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GDF3Q9NR23 364 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 GOLGA6AQ9NYA3 693 aa16.06■□□□□ 0.16
LETMD1-209ENST00000547318 SIPA1L1O43166 1804 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 CYP3A4P08684 503 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
LETMD1-209ENST00000547318 TNNC1P63316 161 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 KCNH2Q12809 1159 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 TATDN1Q6P1N9 297 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
LETMD1-209ENST00000547318 SRLQ86TD4 932 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 PBKQ96KB5 322 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 NLRC4Q9NPP4 1024 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
LETMD1-209ENST00000547318 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
LETMD1-209ENST00000547318 A0A0A6YYK5 440 aaPredicted RBP16.04■□□□□ 0.16
LETMD1-209ENST00000547318 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 AGPSO00116 658 aa16.04■□□□□ 0.16
LETMD1-209ENST00000547318 MEIS2O14770 477 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms