RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 MCM2P49736 904 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 EPHB4P54760 987 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 ACTR2P61160 394 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 HMGN5P82970 282 aaKnown RBP12.43□□□□□ -0.42
GCN1-202ENST00000547263 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
GCN1-202ENST00000547263 LRIT3Q3SXY7 679 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 EARS2Q5JPH6 523 aaKnown RBP12.43□□□□□ -0.42
GCN1-202ENST00000547263 RASIP1Q5U651 963 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 ABHD15Q6UXT9 468 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 CCDC83Q8IWF9 413 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 ETNPPLQ8TBG4 499 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 DHX38Q92620 1227 aaKnown RBP12.43□□□□□ -0.42
GCN1-202ENST00000547263 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 PRDM5Q9NQX1 630 aaPredicted RBP12.43□□□□□ -0.42
GCN1-202ENST00000547263 TBC1D22BQ9NU19 505 aa12.43□□□□□ -0.42
GCN1-202ENST00000547263 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 TRIOBPQ9H2D6 2365 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 SIP14410 1827 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 MYH9P35579 1960 aaKnown RBP12.42□□□□□ -0.42
GCN1-202ENST00000547263 NOP56O00567 594 aaKnown RBP12.42□□□□□ -0.42
GCN1-202ENST00000547263 MSH4O15457 936 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
GCN1-202ENST00000547263 KRT40Q6A162 431 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
GCN1-202ENST00000547263 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 RPAINQ86UA6 219 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 TDHQ8IZJ6 230 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 RIT2Q99578 217 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 HIPK3Q9H422 1215 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 KCNMB3Q9NPA1 279 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
GCN1-202ENST00000547263 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
GCN1-202ENST00000547263 SORBS3O60504 671 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 PSMD10O75832 226 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 TDP2O95551 362 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 CYP2C9P11712 490 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 GCFC2P16383 781 aaKnown RBP12.41□□□□□ -0.42
GCN1-202ENST00000547263 KRT2P35908 639 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 ZNF76P36508 570 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 SLC26A2P50443 739 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
GCN1-202ENST00000547263 FPGSQ05932 587 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 NR5A1Q13285 461 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 PTK7Q13308 1070 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 GPNMBQ14956 572 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 PTGISQ16647 500 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 PRR16Q569H4 304 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 WNT8BQ93098 351 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
GCN1-202ENST00000547263 ZNF577Q9BSK1 485 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 UBE2OQ9C0C9 1292 aaKnown RBP12.41□□□□□ -0.42
GCN1-202ENST00000547263 RNPEPQ9H4A4 650 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 SMARCAD1Q9H4L7 1026 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 ERAP1Q9NZ08 941 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
GCN1-202ENST00000547263 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
GCN1-202ENST00000547263 NRCAMQ92823 1304 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 BTBD18B2RXH4 712 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 TBX3O15119 743 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 CSF2RAP15509 400 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 CYP2C18P33260 490 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 KRT76Q01546 638 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 CUL4AQ13619 759 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 INF2Q27J81 1249 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 NEK8Q86SG6 692 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
GCN1-202ENST00000547263 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
GCN1-202ENST00000547263 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
GCN1-202ENST00000547263 MAFBQ9Y5Q3 323 aaPredicted RBP12.4□□□□□ -0.42
GCN1-202ENST00000547263 IGSF9BQ9UPX0 1349 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 CCDC194A0A1B0GVG4 234 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 SLC37A4O43826 429 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 CAND2O75155 1236 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 CXCL10P02778 98 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 ATP4AP20648 1035 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 RFC2P35250 354 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
GCN1-202ENST00000547263 PPIGQ13427 754 aaKnown RBP eCLIP12.39□□□□□ -0.432e-10■■■□□ 16.1
GCN1-202ENST00000547263 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 MARCH8Q5T0T0 291 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 CCDC60Q8IWA6 550 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms