RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
CACNB3-204ENST00000547230 LINC00116Q8NCU8 138 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 OR2W6PQ8NHA6 318 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 RAB34Q9BZG1 259 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 ISCUQ9H1K1 167 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 PLCB1Q9NQ66 1216 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 PANK4Q9NVE7 773 aa13.92□□□□□ -0.18
CACNB3-204ENST00000547230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.92□□□□□ -0.18
CACNB3-204ENST00000547230 PPARDQ03181 441 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 HLTFQ14527 1009 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 PTPROQ16827 1216 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 CABS1Q96KC9 395 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 CEP63Q96MT8 703 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 LRRC27Q9C0I9 530 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 AIPL1Q9NZN9 384 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 E7EVH7 732 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 H0YGN5 161 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 KIF4AO95239 1232 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 FAM107AO95990 144 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 HOXA7P31268 230 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 USP8P40818 1118 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 TNNI2P48788 182 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 KCNQ4P56696 695 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 RPS6KA1Q15418 735 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 KCTD19Q17RG1 926 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 DNAAF5Q86Y56 855 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 TAF4BQ92750 862 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 RTFDC1Q9BY42 306 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-204ENST00000547230 NEUROG2Q9H2A3 272 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 CENPHQ9H3R5 247 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 NFS1Q9Y697 457 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 ARFGEF1Q9Y6D6 1849 aa13.91□□□□□ -0.18
CACNB3-204ENST00000547230 MARSP56192 900 aaKnown RBP13.9□□□□□ -0.18
CACNB3-204ENST00000547230 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-204ENST00000547230 RNF187Q5TA31 235 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-204ENST00000547230 HAS1Q92839 578 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 PCDHA2Q9Y5H9 948 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 NPHP3-ACAD11A0A0J9YXS1 232 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 CES2O00748 559 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 ACTN1P12814 892 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 USP11P51784 963 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 GSTO1P78417 241 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 PTK2Q05397 1052 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 ZNF844Q08AG5 666 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 IFT88Q13099 833 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 UBE2SQ16763 222 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 SCFD2Q8WU76 684 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-204ENST00000547230 ZNF287Q9HBT7 754 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 PPANQ9NQ55 473 aaKnown RBP13.9□□□□□ -0.18
CACNB3-204ENST00000547230 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
CACNB3-204ENST00000547230 GOLGA6L10A6NI86 522 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 SRRM3A6NNA2 597 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 BTNL10A8MVZ5 291 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 BHMG1C9JSJ3 638 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 E9PMD0 336 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 KCNQ2O43526 872 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 CEP104O60308 925 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 ZBTB48P10074 688 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 PDHBP11177 359 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 BTDP43251 543 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 SEPT2Q15019 361 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 C6orf89Q6UWU4 347 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 ZNF571Q7Z3V5 609 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 CCDC91Q7Z6B0 441 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 KCTD10Q9H3F6 313 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 VCPKMTQ9H867 229 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 SLC12A6Q9UHW9 1150 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 hCG_1984214I3L0E3 225 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 GNA14O95837 355 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 MYZAPP0CAP1 466 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 ACTN3Q08043 901 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 CUL1Q13616 776 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 ZNF713Q8N859 430 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 LRRC57Q8N9N7 239 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 EIF1ADQ8N9N8 165 aaKnown RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
CACNB3-204ENST00000547230 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 TNRC6CQ9HCJ0 1690 aaKnown RBP13.89□□□□□ -0.19
CACNB3-204ENST00000547230 TM4SF1P30408 202 aa13.88□□□□□ -0.19
CACNB3-204ENST00000547230 FLT3P36888 993 aa13.88□□□□□ -0.19
CACNB3-204ENST00000547230 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms