RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 CLP1Q92989 425 aaKnown RBP11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 CNTNAP3BQ96NU0 1288 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 C11orf84Q9BUA3 381 aaPredicted RBP11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 SMOC2Q9H3U7 446 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
R3HDM2-210ENST00000547019 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 NT5C2P49902 561 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 TRDNQ13061 729 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 DGKDQ16760 1214 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 CCDC96Q2M329 555 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 BTNL9Q6UXG8 535 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 DNERQ8NFT8 737 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 VN1R2Q8NFZ6 395 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 SUSD6Q92537 303 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 RIPOR3Q96MK2 946 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 PHF7Q9BWX1 381 aaPredicted RBP11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 KRT23Q9C075 422 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 IRF2BPLQ9H1B7 796 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
R3HDM2-210ENST00000547019 CEP250Q9BV73 2442 aa11.46□□□□□ -0.58
R3HDM2-210ENST00000547019 SLC27A2O14975 620 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 SORBS3O60504 671 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 REC8O95072 547 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 RB1P06400 928 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 HOXD8P13378 290 aaPredicted RBP11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 CASTP20810 708 aaKnown RBP11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 SP100P23497 879 aaPredicted RBP11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 HOXC8P31273 242 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 ZNF689Q96CS4 500 aaPredicted RBP11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 IL17RAQ96F46 866 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 CDH22Q9UJ99 828 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
R3HDM2-210ENST00000547019 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 FANCMQ8IYD8 2048 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 CACNA1GO43497 2377 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 E7EWF7 191 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 TREHO43280 583 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 ITGB1P05556 798 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 NRIP1P48552 1158 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 NOVP48745 357 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 CREB3L3Q68CJ9 461 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 RBM23Q86U06 439 aaKnown RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 PPTC7Q8NI37 304 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 SEPT8Q92599 483 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 EMID1Q96A84 441 aaPredicted RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 MAP1BP46821 2468 aaKnown RBP11.44□□□□□ -0.58
R3HDM2-210ENST00000547019 BAHCC1Q9P281 2608 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 BRD1O95696 1058 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 SPPL3Q8TCT6 385 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 C16orf70Q9BSU1 422 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 KATNAL1Q9BW62 490 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 MRPL42Q9Y6G3 142 aaKnown RBP11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 ACACBO00763 2458 aa11.43□□□□□ -0.58
R3HDM2-210ENST00000547019 DENND4AQ7Z401 1863 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 NUBP1P53384 320 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 CYB5R4Q7L1T6 521 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 DCAF4Q8WV16 495 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 LINC01599Q8WXQ3 324 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 ZSCAN10Q96SZ4 725 aaPredicted RBP11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 CPVLQ9H3G5 476 aa11.42□□□□□ -0.58
R3HDM2-210ENST00000547019 WDR19Q8NEZ3 1342 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 OTOGLQ3ZCN5 2332 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 ERICH2A1L162 156 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 PER2O15055 1255 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 SMIM10L2AP0DMW4 78 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 SMIM10L2BP0DMW5 78 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 SART3Q15020 963 aaKnown RBP11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 USH1GQ495M9 461 aa11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 CWF19L1Q69YN2 538 aaKnown RBP11.41□□□□□ -0.58
R3HDM2-210ENST00000547019 DGLUCYQ7Z3D6 616 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms