RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
TROAP-204ENST00000546776 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
TROAP-204ENST00000546776 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
TROAP-204ENST00000546776 GADD45BO75293 160 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 SNAI1O95863 264 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 ZNF865P0CJ78 1059 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 KCNA2P16389 499 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 SFNP31947 248 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 JAK3P52333 1124 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 IL17AQ16552 155 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 ZNF746Q6NUN9 644 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 SMAP1Q8IYB5 467 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 RDM1Q8NG50 284 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 XPNPEP3Q9NQH7 507 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 VAV3Q9UKW4 847 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
TROAP-204ENST00000546776 BRCA2P51587 3418 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
TROAP-204ENST00000546776 DOCK5Q9H7D0 1870 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 RBM47A0AV96 593 aaKnown RBP12.6□□□□□ -0.39
TROAP-204ENST00000546776 POTEMA6NI47 508 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 WDR64B1ANS9 1081 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 NKRFO15226 690 aaKnown RBP eCLIP12.6□□□□□ -0.39
TROAP-204ENST00000546776 EVI5O60447 810 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 GRIN1Q05586 938 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 ITGB3BPQ13352 177 aaPredicted RBP12.6□□□□□ -0.39
TROAP-204ENST00000546776 MIER3Q7Z3K6 550 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 CABP7Q86V35 215 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
TROAP-204ENST00000546776 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 NT5C3AQ9H0P0 336 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 SLC9A2Q9UBY0 812 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
TROAP-204ENST00000546776 KCNH3Q9ULD8 1083 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
TROAP-204ENST00000546776 LOXHD1Q8IVV2 1947 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 A0A1B0GVL5 298 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 CHMP2AO43633 222 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
TROAP-204ENST00000546776 ATP9AO75110 1047 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 GGPS1O95749 300 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 PFKFB1P16118 471 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 SYKP43405 635 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 SPIRE1Q08AE8 756 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 EPHA7Q15375 998 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 SPECC1Q5M775 1068 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 METTL7BQ6UX53 244 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 DIS3LQ8TF46 1054 aaKnown RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 GJA10Q969M2 543 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 EPSTI1Q96J88 318 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
TROAP-204ENST00000546776 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
TROAP-204ENST00000546776 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.4
TROAP-204ENST00000546776 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
TROAP-204ENST00000546776 GH1P01241 217 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 PSAPP07602 524 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 MUTP22033 750 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 CCT6AP40227 531 aaKnown RBP12.58□□□□□ -0.4
TROAP-204ENST00000546776 TNFAIP2Q03169 654 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 LRRC41Q15345 812 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
TROAP-204ENST00000546776 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
TROAP-204ENST00000546776 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 CCDC62Q6P9F0 684 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 B3GNT9Q6UX72 402 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 CYFIP1Q7L576 1253 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
TROAP-204ENST00000546776 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms